Tupaia chinensis (Chinese tree shrew): 102492116 Help Entry 102492116         CDS       T02978                                  Symbol COL3A1 Name (RefSeq) collagen type III alpha 1 chain   KO K19720   collagen type III alpha Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup04611   Platelet activation tup04820   Cytoskeleton in muscle cells tup04926   Relaxin signaling pathway tup04933   AGE-RAGE signaling pathway in diabetic complications tup04974   Protein digestion and absorption tup05146   Amoebiasis tup05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:tup00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     102492116 (COL3A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     102492116 (COL3A1)   09152 Endocrine system    04926 Relaxin signaling pathway     102492116 (COL3A1)   09154 Digestive system    04974 Protein digestion and absorption     102492116 (COL3A1)  09160 Human Diseases   09174 Infectious disease: parasitic    05146 Amoebiasis     102492116 (COL3A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     102492116 (COL3A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     102492116 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tup00536]     102492116 (COL3A1) Glycosaminoglycan binding proteins [BR:tup00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102492116 (COL3A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  102492116 NCBI-ProteinID:  XP_006147906 LinkDB All DBs Position Un AA seq 1466 aa AA seqDB search MMSFVQKGTWLLLALLYPTVTLAQDQQQVIENGCTHLGQSYAEKDVWKPEPCQICVCDLG SVLCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTYPPDGYGPQGPKGDPGPPGIPG RNGDPGIPGQPGSPGSPGPPGICESCSGNQNYSPQFDSYDVKSGVGGAIGGYPGPAGPPG PPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRPG ERGLPGPPGLKGPAGIPGFPGMKGHRGFDGRNGEKGDTGAPGLKGENGLPGENGAPGPMG PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTVGFPGSPGAKGEVGPAGSPG SNGSPGARGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPPG ANGSPGQRGGAGEPGKNGAKGEPGPRGERGEAGSPGIPGAKGEDGKDGSPGEPGANGLPG AAGERGAPGFRGPAGPNGKRXFTLGPPGDRGGPGPAGPRGAAGEPGRDGVPGGPGLRGMP GSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGP GGPGLPGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGPGGPPGENGKPGEA GPKGEAGAPGTPGGKGDAGAPGERGPQGLAGAPGLRGLNGPPGPEGGKGPAGPPGPPGLS GSPGLQGMPGERGGPGAPGPKGEKGEPGGAGADGAPGKDGPRGPTGPIGPPGPAGQPGDK GEGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPP GVAGPPGGSGPAGPPGPQGVKGDRGSPGGPGAAGFPGARGLPGPPGNNGNPGPPGPGGAP GKDGPPGPAGSNGAPGSPGISGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGQRGLA GPPGMPGPRGSPGPQGIKGESGKPGASGLNGERGPPGPQGLPGLAGTAGEPGRDGNPGSD GLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGQSGDRGETGPAGPSGAPGPA GSRGPPGPQGPRGDKGETGERGSNGIKGHRGFPGNPGSPGSPGSPGHQGAIGSPGPAGPR GPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGLPGPPGPPGAPGPCCGG GAAAIAGVGGEKSGGFAPYYGDDPMDFKINSEEIMSSLKSVHGQVENMICPDGSRKNPAR NCRDLKFCHPEFKSGIYWVDPNQGSRMDAINAFCDMNTGETCVKPSPSDVPRKNWRSHSN TKKTHVWFGEAVDGGFQFSYGNPELPEDVLFGQLAYLRLLSSRASQNITYHCKNSIAYMD HSNGNLKKALKMRGSNEDELKAEEKGKLTYTVLEDGCTTHTGKWSKTVFEYRTRKAMILP IVDIAPFDFGDADQEFGFDLSPVCFL NT seq 4401 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaaaggggacctggttacttcttgctttgctttatcccactgtt actttggcacaagatcagcagcaagttattgagaatggatgcacccatcttggtcaatcc tatgcggagaaagatgtctggaagccggaaccatgccaaatatgtgtctgtgatttagga tctgtactctgtgatgacataatatgtgacgatcaagaactagattgccccaacccagaa atcccatttggagaatgttgcgctgtttgcccacaacctccgacagctcccacttaccca cctgatggttatggacctcaaggccccaaaggagatccaggccctcctggtattcctggg agaaatggtgaccctggtattccaggacaaccaggttcccctggttctcctggcccccct ggaatctgtgaatcatgctctggtaatcagaactattctccccagtttgattcatatgat gtcaagtctggagtaggaggagcaatcggtggctatcctgggccggctggtcctccaggc cctcctggtccccctggcacatctggtcatcctggctctcctggttctccaggataccaa ggtccccctggtgaacctggacaagctggtcccgcaggtcctccaggacctcctggtgct attggtccatctggtcctgctggaaaagatggagagtcaggaagacctggacgacctgga gagagaggattgcctggacccccaggtctcaaaggtccagctggcatacccggattccct ggtatgaaaggacacagaggcttcgatggacgaaatggagaaaaaggtgatacaggcgct cctggattaaagggtgaaaatggtcttccaggtgaaaatggagctcctggacccatgggt ccaagaggtgctcctggcgagagaggacgcccagggcttcctggagctgccggggctcga ggtaatgatggagctcgaggtagcgacggtcaaccaggtccccctggtcctcctggaact gtaggattccctggatcccctggtgctaagggtgaagttggacctgcagggtctcctgga tcaaatggctcccctggagcaagaggagaacctggacctcagggacatgctggtgctcaa ggtcctcctggccctcctgggattaacggtagtcctggtggtaaaggtgaaatgggtccc gctggcattcccggagctcctggactgatgggtgcccggggtcctcctggaccacccggt gctaatggctctcctggacagcgaggtggtgcaggtgaacctggtaagaatggtgctaaa ggagagccaggaccacgtggtgaacgtggggaagcaggttctccgggtattccaggcgct aagggtgaagatggcaaagatggatcaccaggagaacccggtgcaaatggacttccagga gctgcaggagaaaggggtgcccctggattccgaggacctgcgggaccaaatggcaaaagg taatttactttaggtcctcctggggaccgtggtggtccaggccctgcagggcccagagga gcagctggagaacctggtcgagatggtgtccctggaggtccaggattgaggggtatgcct ggaagtccaggaggaccaggaagtgatggaaaaccagggcctccaggaagtcaaggagaa agtggtcgaccaggtcctccagggccatctggtccccgaggtcagcctggtgtcatgggt ttccctggacccaaaggaaatgatggtgcccctggcaagaatggagaacgaggtggccct gggggacctggccttccaggtcctcctggaaagaatggtgaaactggacctcaaggtccc ccaggacctactgggccaggtggtgacaaaggagacacaggaccccctggtccacaggga ttacaaggcttgcctggtcctggtggtcctccaggagaaaatggaaaacctggtgaagca ggtccaaaaggtgaagcaggtgcacctggaactccaggcggcaagggtgatgctggtgca cctggtgaacgtggacctcagggattggcaggggcaccaggacttcgaggtttaaatggt cccccaggtcccgaaggaggaaagggccctgctggtcctcctgggccacctgggctttct ggatctcctggtctacaagggatgcctggagagagaggaggtcctggagctcctggtcca aaaggtgaaaagggagaaccaggtggagcaggtgctgatggagctccagggaaagatggt ccaagaggtcctactggtcccattggtcctcccggcccagctggccaacctggagataag ggtgaaggtggtgcccctggacttccaggtatagctggaccgcgtggtggccctggtgag agaggcgaacatgggcctccaggacctgccggtttccctggtgctcctggacagaatggc gagcctggtgccaaaggagaaagaggcgctccaggtgagaagggtgaaggaggccctcct ggagttgcaggaccccctggaggttctggacctgctggtcctcctggtcctcaaggtgtc aaaggtgaccgtggcagtcctggtggtcctggtgctgctggctttcctggtgctcgtggt cttcctggtcctcctggtaataatggtaacccaggacccccaggccctggtggtgctcca ggcaaagatggacctccaggtcctgcaggaagcaatggtgctcctggaagcccaggaata tctggaccaaaaggtgatgctggccaaccaggagagaagggatcacctggtgctcaaggc cctccaggagctcccggcccacttgggattgcagggattactggacaacgaggtttggca ggaccaccaggcatgccaggtcctaggggaagccctggcccacagggcatcaagggtgaa agtgggaaaccaggagctagtggtctaaatggagaacgtggtcctcctggacctcagggc cttcctggtctggctggtacagctggtgaacctgggagagatggaaaccccggatcagat ggtctgcccggccgagatggatctcctggtggcaagggtgatcgtggagaaaacggctct cctggtgctcctggtgctcctggtcatccaggcccacctggtcctgttggtccagctgga cagagtggtgacagaggagaaactggccctgctggtccatctggtgctcctggtcctgct ggttcccgaggccctcctggtccccaaggcccacgtggtgacaaaggtgaaacaggtgaa cgtggttctaatggcatcaaaggacacagaggattccctggtaacccaggttccccaggt tctccaggttctcctggtcaccagggtgctattggcagtccaggacctgcaggccccaga ggaccagttggacccagtggaccccctggcaaagatggaacaagtggccatccaggtccc attgggccaccaggacctcgaggtaacagaggtgaaagaggatctgagggttctccaggc cacccaggactgccaggccctcctggaccacctggtgccccaggtccttgctgtggtggt ggagcagctgccattgctggggttggaggtgaaaaatctggtggttttgccccatattat ggagatgacccaatggatttcaaaatcaacagcgaagagattatgtcttcactcaaatct gttcatggacaagtagaaaacatgatttgccctgatggttctcgtaaaaaccctgctcgg aactgcagagacctgaaattctgccatcctgaattcaagagcggaatatactgggttgat cctaatcaaggttccaggatggatgctatcaatgcattttgtgatatgaatactggcgaa acatgtgtaaaacccagtccttcagatgttccacgtaaaaactggcggtcacattccaat actaaaaagacacatgtttggtttggagaggcagtagatggtggttttcagtttagctat ggcaatcctgagcttcctgaagatgtcctctttggccagctggcttatcttcgacttctc tctagtcgagcctcccagaacatcacctatcactgcaagaatagcattgcatacatggat cactccaatgggaatctaaagaaagccctgaagatgagagggtcaaatgaagatgaactc aaagctgaagaaaagggcaaactcacatacacagttctggaggatggctgcactacacac actgggaaatggagcaaaacagtctttgaatatcgaacgcgcaaggccatgatactacct attgtggatattgcaccctttgactttggtgatgctgatcaagaatttggttttgacctt agcccggtttgctttttataa

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