Tupaia chinensis (Chinese tree shrew): 102492534
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Entry
102492534 CDS
T02978
Symbol
LRFN5
Name
(RefSeq) leucine rich repeat and fibronectin type III domain containing 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102492534 (LRFN5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tup04515
]
102492534 (LRFN5)
04990 Domain-containing proteins not elsewhere classified [BR:
tup04990
]
102492534 (LRFN5)
Cell adhesion molecules [BR:
tup04515
]
Immunoglobulin superfamily
SALM family
102492534 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
tup04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
102492534 (LRFN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
FN3_DSCAM-DSCAML_C
C2-set_3
Ig_PDGFR_d4
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
102492534
NCBI-ProteinID:
XP_006148544
LinkDB
All DBs
Position
Un
AA seq
719 aa
AA seq
DB search
MEKILLYLFFIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLE
GQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIAS
NPAGEATQTVELHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNASSSNGDTKMSQDK
IVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLAAGT
MYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVAS
VLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQIQGCSVTLPQSVSKQAVGPEENT
QCCKVANDNVIQSSETCSSQDSSTTTSALPPTWTSSTSMSQKQKRKTGTKPSTEPQSEAV
TNVESQNTNRNNSTALQLASRPPDSVTEGPTSKRAHTKPNALMTNVDQIVQEAQRLELI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattcttttatatctgtttttcattggcatagcagtgagagctcagatctgt
ccaaagcgttgtgtctgtcagattttgtctcctaatcttgcaaccctttgtgccaagaaa
gggcttttatttgttccaccaaacattgacagaagaactgtggaactgcggttggcagac
aattttgttacaaatattaaaaggaaagattttgccaatatgaccagcttggtggacctg
actctatccaggaatacaataagttttattacacctcatgcttttgctgacctacgaaat
ttgagggctttacatttgaatagcaacagattgactaagataacaaacgacatgttcagt
gggctttccaacctccatcatttgatactgaacaacaatcagctgactttaatttcctct
acagcatttgacgatgtatttgcccttgaggagctcgatctgtcctataataatctagaa
accattccttgggatgctgttgagaagatggttagcttgcatacccttagtttggatcac
aacatgattgataacattcctaaggggactttctcccacttacataagatgactcggcta
gatgtaacatcaaataaattgcagaagctaccacctgaccctctctttcagcgagctcag
gtactagcaacctcaggaatcataagtccatcgactttcgcattaagttttggtggaaac
cccttgcattgcaactgcgaattgttgtggttaaggcgtctgagcagagaagatgaccta
gaaacctgtgcttctcctgcacttttaactggccgctacttctggtccattcctgaggag
gagtttctgtgtgaacctcctctcattactcgtcatacacatgagatgagagtcctggag
ggtcagagagcaacgctgcggtgcaaagcccggggagaccctgaacctgccattcactgg
atctctcctgaaggaaaacttatttcaaatgcaacaagatctctggtgtatgataatgga
acccttgacatccttataacgactgtgaaagatacaggtgcttttacctgcattgcttcc
aatcctgcgggggaagcaacacaaacagttgaacttcatataattaagctccctcactta
ctaaacagtacaaaccacatccatgagcctgatcctggttcttcagacatctcaacttct
actaagtcaggttcgaatgcaagcagtagtaacggagatactaaaatgagtcaagataaa
attgttgtggcagaagcaacatcatcaacggcactacttaaatttaattttcaaagaaat
atccctgggatacgtatgtttcaaatccagtacaatggtacttacgatgacacccttgtt
tacagaatgatacctcccacgagcaaaacttttctggtcaataatctggctgctggaact
atgtatgacttgtgtgtcttggcaatatatgacgatggcatcacttccctcactgccaca
agagtcgtgggttgcatccagtttactacggaacaggattatgtgcgttgccatttcatg
cagtcccagtttttgggaggcaccatgattattattattggtggaataattgtagcatct
gtgttggttttcatcattattctcatgatccggtataaggtttgtaacaataacgggcaa
cacaaggtcaccaaggttagcaatgtttattctcaaactaacggggctcaaatccaaggc
tgcagtgtaacactgccccagtccgtgtccaaacaggctgtggggcctgaagagaacacc
cagtgttgtaaagtggccaatgacaatgtgattcaatcttctgaaacttgttcgagtcag
gactcctctaccactacctctgctttgcctcctacctggacttcaagcacttctatgtcc
caaaagcagaaaagaaagactggcacaaagccaagtaccgaaccacagagtgaagctgtt
acaaatgtcgaatcgcaaaacactaacaggaacaactcaactgcattgcagttagctagc
cgaccgcctgattctgtcacagagggacccacatctaaaagagcacacacaaagccaaat
gctttgatgactaatgttgaccagattgtccaggaagcacagaggctggagttaatctga
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