Tupaia chinensis (Chinese tree shrew): 102493490
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Entry
102493490 CDS
T02978
Symbol
CIITA
Name
(RefSeq) class II major histocompatibility complex transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04612
Antigen processing and presentation
tup05145
Toxoplasmosis
tup05152
Tuberculosis
tup05164
Influenza A
tup05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
102493490 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102493490 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
102493490 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
102493490 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
102493490 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tup01001
]
102493490 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tup04054
]
102493490 (CIITA)
Enzymes [BR:
tup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102493490 (CIITA)
Protein kinases [BR:
tup01001
]
Serine/threonine kinases: Other
TAF1 family
102493490 (CIITA)
Pattern recognition receptors [BR:
tup04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102493490 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_8
NLRC4_HD2
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
102493490
NCBI-ProteinID:
XP_006146581
LinkDB
All DBs
Position
Un
AA seq
1130 aa
AA seq
DB search
MRCLASRAAGSHLSEPPGSGQHATMELGPLEGSYLELLNSDADPLRLYHFYDQMDLAGEE
EIELCSEPDTDTINCEQVSRLLCDIEGDEETREAYANIAELDQYVFQDFHFEGLNKDAFI
EHIGSDDVLGESVEVPVETGQKSQKRPFPEELPTDLKHRKLAESSPVPVVTGSFLVGPAS
LSPGLPCPPPTLFSQEPASSQTCLEHAVQRPVPPSSSSLSCLNLPAGPIQFIPTLPQGFW
QISGPGTGVSSILIYPGQMAQASQAPPSSSPTVPGLPKSPDRPGSTSPFAPSATDLPSMP
EPALTSRAKVTEDEVSPTKCPEVQEVSGKLPKWPETVEQFRRSLQDKYLAEPAGLEGVLV
EMELVRARLERSSNKSQERELVTLDWAERQPVPEGLAEVLLADSQHRRQRETQVIAVLGR
AGQEKSCWARAVSRAWARGQLPQYDFVFHIPCRCVDRPGDTYRLQDLLFSLGPQPLVADD
EVFGHISRRPDRVLLILDAFEELEAQDGFLHSTCKPGATEPRSVRALLAGLFQRKLLRGC
TLLLTARPRGRLAQSLSKADALFEMAGFSAPQAQSYVRRYFECSEAAEHTERAQALFRDQ
PFLLSHGHSPTVCQAVCQLSEALLRLGDEAQLPSTLTGLYVGLLGPAARDGPPGALVGLA
KLAWELGRRHQGTLRKGQFPSEEVRTWAVAQGLVQPALGAVEETELAFCSFLLQCFLGAV
WLALSSEIKDKELLQYLALTPRKKRPYDNWLEGLPRFLAGLIFQPRARCLGALVGSVAAT
VVDREXXXXXXXXXXLQPGKLPAGRLLELLHCAYEAEDAGIWRHVVQALPAGLSFLGTRL
APPDVHVLGRALEAAGRDFSLDLRSTGIDPSGLGSLVGLRCVTHFRAALSDTVGLWESLR
QRGETELLQAAEEKFTIEPFQAKSLKDVEDLGNLVQTQRMRNSLEDSTGELPAVRDLKKL
EFALGPILGPQAFPKLVKILTAFSSLQHLDLDSLSENKIGDEGVSQLAATFPQLKALETL
NLSQNSITDVGACKLAEALPTLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVVYVQ
YNKFTAVGAQQLATSLKKCPQVKTLAMWTPTIPFGVQEHLQQLDSRISLR
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcctggcgtcacgtgctgcagggtcacacctgtcagagcccccaggcagtgga
cagcacgccaccatggagctggggcctctggaaggcagctacctggagcttctcaacagc
gatgccgaccccttgcgcctctaccacttctacgaccagatggacctggctggagaagaa
gagatcgagctctgctcagaacccgacacggacaccatcaactgtgagcaggtcagcagg
ctgctgtgcgacatagaaggtgatgaagagaccagggaagcgtatgccaacatcgcggaa
ctggaccagtacgtgttccaggactttcactttgagggcctgaacaaggacgctttcata
gagcacataggatcagatgacgtgctcggagagagtgtggaggtgccggtggaaacagga
cagaaaagtcagaaaagaccctttccagaggagctgcccaccgacctgaagcacaggaag
ctagccgagtcctctcctgtgcctgtggtgactggcagtttcctggtggggccggcgagt
ctctcccctggcctgccctgcccgccacctactctgttcagccaggagccagcgtccagc
cagacctgcctggagcacgctgtccagaggcctgtgcccccctccagctcctcgctgagc
tgcctcaacctccccgccgggcccatccagttcatccccaccctgccccaggggttctgg
caaatctcaggacctgggacaggagtctccagtatactcatctaccctggccagatggcc
caggccagccaagcgcccccttccagcagccccactgtgcccggccttcccaagtcccca
gaccggcctggctccactagccccttcgctccatctgcaactgacctgcccagcatgccg
gaaccagccctgacctcccgggcaaaggtgacagaggatgaagtgtctcccactaaatgc
ccagaggttcaagaggtctccggcaagcttccaaaatggcctgagacagtggagcagttc
cgccgctcactgcaggacaagtacctggcggagcctgcaggcctggagggcgtcctggtg
gagatggagctggtgcgggcacggctggagcggagcagcaacaagagccaggagagggag
ctggtcactctggactgggcggagcggcagccggtccctgagggtctggccgaggtgctc
ctggcagacagccagcaccggcggcagcgagagacgcaagtgattgctgtgctgggcaga
gccgggcaggagaagagctgctgggcccgggcggtgagccgggcctgggccaggggccag
ctgccgcagtacgacttcgtcttccacatcccctgccgctgtgtggaccggccgggggac
acctaccgcctgcaggatctgctcttctccctgggcccgcagccactggtggcagatgac
gaggtcttcggccacatctcgaggaggcctgaccgggttctgctcatcctcgatgccttt
gaagagctcgaagcccaggacggcttcctgcacagcacgtgcaagcccggggccaccgag
ccacgctccgtccgggcgctgctggctgggctgttccagcggaagctgctgcgaggctgc
accctgctgctcaccgcgaggccccggggccgcctggctcagagcctgagcaaggcggat
gccctgttcgagatggcgggcttctcagccccgcaggcccagtcctatgtgcgccgctac
ttcgagtgctcagaagctgcggagcacacagagagagcccaggcactcttccgggaccag
ccctttctgctcagccatggccacagcccgacagtgtgccaagccgtatgccagctctct
gaggccctgctgaggctgggtgatgaggcccagctgccctctacgctcacgggactctac
gttggcctgctgggcccagcagcccgtgatggtcccccgggggccctggtgggcctggcc
aagttggcctgggagttgggccgcaggcatcaagggaccttgcggaagggccagttccca
tccgaggaggtgaggacctgggccgtggcccaaggcttggtgcagcccgccctgggggcc
gtggaggagacggagctggccttctgcagcttcctgctgcagtgcttcctgggggccgtg
tggctggctctgagcagtgaaatcaaggacaaggagctgctgcagtatttggccttgacc
cctcggaagaagaggccctatgacaactggctggagggcctgccccgctttctggccggg
ctgatcttccagcctcgcgcccgctgcctgggagccctggttgggtccgtggcagccact
gtggtggacagggagcnnnnnnnnnnnnnnnnnnnnnnnnnnnggctgcagccagggaag
ctgccggccgggaggctgctggagctgctgcactgcgcctacgaggcggaggacgctggg
atttggcggcacgtggtgcaagcgctccccgcaggcctgtccttcctgggcacccggctc
gcccctcccgatgtgcatgtgctgggcagggccttggaggcagcgggccgagacttctcc
ctggacctccgcagcacgggcattgacccctccggactgggcagcctcgtgggactccgc
tgtgttacccatttcagggctgccttgagcgacacagtggggctgtgggagtccctgcgg
cagcgtggggagacggagctgctccaggcagcagaggagaagttcaccatcgagcctttc
caagccaagtccctgaaggatgtggaagacctgggcaacctcgtgcagacgcagaggatg
agaaattccttggaagactccactggggaacttcctgctgtccgggacctgaagaagctg
gagtttgcgttgggacccatcttgggcccccaagctttccccaaactggtgaagatcctc
acggccttttcttcccttcagcatctggacctggactcgctgagtgagaacaagattggg
gacgagggtgtctcgcagctcgcagccaccttccctcagctcaaggccctggaaacactc
aacctgtcccagaacagcatcactgacgtgggtgcctgcaagctcgccgaggccctgccc
acacttgccgcgtccctgctcaggctcagcttgtacaataactgcatctgcgacgtggga
gccgagagcctggcccgggtgcttcccgacatggtgtccctccgggtggtctatgtccag
tacaacaagttcacggccgtgggggcccagcagctcgccaccagcctgaagaagtgccct
caggtgaagacgctggcgatgtggacgcccaccattccattcggcgtccaggaacacctg
cagcagctggactcacggatcagcctgagatga
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