Tupaia chinensis (Chinese tree shrew): 102493493
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Entry
102493493 CDS
T02978
Symbol
PDZRN3
Name
(RefSeq) PDZ domain containing ring finger 3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tup04121
]
102493493 (PDZRN3)
Enzymes [BR:
tup01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102493493 (PDZRN3)
Ubiquitin system [BR:
tup04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102493493 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
102493493
NCBI-ProteinID:
XP_006146757
LinkDB
All DBs
Position
Un
AA seq
783 aa
AA seq
DB search
MGCSLCSLQKQEEQYKLLYEVCQVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTK
MFTPPSESQLVDTGTQTDITFEHIMALTKMSSPSPPVLGPYLLPEEHPSAHEYYDPNDYM
GDIHQEMDREELELEEVDLYRVNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGR
IREGDRIIQINGIEVQNREEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDL
HMDMLEEQHHQAMQFTASVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDES
SEQENNGDDATASSNPLAGQRKLTCSQDTLGSGDLPFSNESFISADCTDADYLGIPVDEC
ERFRELLELKCQMKSTHPYSLYYPSSPLEAAKSDPESVDKELELLNEELRSIELECLSIV
RAHKMQQLKEQYRESWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGES
CRSTPLTLEISPDNSLRRAAEGVSCPGSEGAVGSSEACGPPPRTLLSITEDPEIGTPNCS
PAAKELDLSQSQESRERRASDGSRSPTPSQKGGSAYLASYPHSPYKHAHIPAHAQHYQSY
MQLIQQKSAVEYAQSQMSLVSMCKDLTSSPASEPRMEWKVKIRSDGTRYITKRPVRDRLL
RERALKIREERSGMTTDDDAMSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCL
KEQHGADDRKEMNILELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSV
TTV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtctgtgcagcctgcagaagcaagaggagcagtacaaattactctatgaa
gtttgtcaggtcaacggcaaagacttatccagagcgacgcatgaccaagctgtagaagct
ttcaagacagccaaggagcccattgtggtgcaggtgttgaggagaacgccccggaccaaa
atgttcacacctccgtcggagtcgcagctcgtggacacgggaacccaaaccgacatcacc
tttgaacacatcatggctctcaccaagatgtcctcccccagcccgccggtgctgggtccc
tatctcttgccagaagagcatccctcagcccacgaatactacgatccgaatgactacatg
ggggacatccaccaggagatggacagagaggagctggagctggaggaagtggacctctac
agagtgaacagccaggacaagctgggcctcaccgtgtgctaccggacggacgacgaggac
gacattggcatttatataagcgagatcgaccccaacagcattgcagccaaggacgggcgc
atccgagaaggagaccgcattatccagattaatgggatagaggtacagaaccgtgaagag
gctgtggctcttctcaccagtgaagaaaataagaacttttcattgctgattgcaaggcct
gagctccagctggacgagggttggatggatgacgacaggaatgactttctggatgacctg
cacatggacatgttggaggaacagcatcaccaagccatgcagttcacagccagcgtgctc
cagcagaagaagcacgaggaagatggcgggaccacagatacagccaccatcttgtccaac
cagcatgagaaggacagtggcgtggggcggacagacgagagcacgcgcaacgatgaaagc
tcagagcaggagaacaacggcgacgacgccacggcctctagcaacccactggctgggcag
aggaagctcacctgcagccaggacaccctgggcagcggtgacctgcccttcagcaatgag
tccttcatctcagctgactgcaccgacgccgactacctggggatcccggtggatgagtgc
gagcgcttccgcgagctgctggagctcaagtgccagatgaagagcacgcacccctacagc
ctgtactaccccagcagccccctggaggctgccaagagcgaccctgagagcgtggacaag
gagttggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctgagcatcgtg
cgcgcccacaagatgcagcagctgaaggagcagtaccgcgagtcctggatgctgcacaac
agcggcttccgcaactacaacaccagcatcgacgtgcgcaggcacgagctctcggacatc
accgagctccccgagaaatccgacaaggacagctcaagcgcctacaacaccggggagagc
tgccgcagcacccctctcaccttggagatctcccccgacaactccctgaggagagcagct
gagggtgtcagctgtccaggcagcgaaggggctgtggggtcctctgaggcctgtgggcca
cccccgcggactctgctctccatcacggaagaccccgagataggcacccctaactgtagc
cctgccgcgaaggagctggacctcagccagtcccaggagagcagagagcggagggccagc
gacgggagcaggagtcccacccccagccagaaggggggcagtgcctacctggcctcctac
ccgcactcgccgtacaagcacgcgcacatcccggcccacgcgcagcactaccagagctac
atgcagctgatccagcagaagtcggccgtggagtacgcgcagagccagatgagcctggtg
agcatgtgcaaggacctcacctcctcccccgcctcggagccgcgcatggagtggaaggtg
aagatccgcagcgacgggacgcgctacatcaccaagaggccggtgcgcgaccgcctgctg
cgggagcgcgcgctcaagatccgcgaggagcgcagcggcatgaccaccgacgacgacgcc
atgagcgagatgaagatggggcgctactggagcaaggaggagaggaagcagcacctggtg
aaggccaaggagcagaggcgcaggcgcgagttcatgatgcagagcaggctggattgtctg
aaggagcagcatggggccgacgaccggaaggagatgaacatcctcgaactgagccacaag
aaaatgatgaagaagaggaacaaaaagatctttgacaactggatgacgatccaggaactc
ttaacccacggcacgaaatcacccgacggcactagagtgtacaattcgttcctatctgtg
actactgtataa
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integrated database retrieval system
