Tupaia chinensis (Chinese tree shrew): 102493541 Help Entry 102493541         CDS       T02978                                  Symbol PRPF8 Name (RefSeq) pre-mRNA processing factor 8   KO K12856   pre-mRNA-processing factor 8 Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup03040   Spliceosome Brite KEGG Orthology (KO) [BR:tup00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102493541 (PRPF8)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:tup03041]     102493541 (PRPF8) Spliceosome [BR:tup03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     102493541 (PRPF8)  Complex C    U5 SnRNP specific factors     102493541 (PRPF8) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB Motif Other DBs NCBI-GeneID:  102493541 NCBI-ProteinID:  XP_006167611 UniProt:  L8Y837 LinkDB All DBs Position Un AA seq 2335 aa AA seqDB search MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA NT seq 7008 nt NT seq  +upstreamnt  +downstreamnt atggccggagtatttccttaccgagggccgggtaacccggtccccggccctctagccccg ctgccggactacatgtcagaggagaagctgcaggagaaagctcgaaaatggcagcaattg caggccaagcgctatgcagaaaagcggaagtttgggtttgtggatgctcagaaggaagac atgcccccagaacatgtcaggaagatcattcgggaccatggagacatgaccaacaggaag ttccgccatgacaaaagggtctacttgggagccctaaagtacatgccgcatgcagtcctc aagctcctggagaacatgcccatgccttgggaacagattcgagatgtgcctgtgctatac cacattactggggccatttccttcgtcaatgagattccctgggtcattgagcctgtctac atctcccagtgggggtcaatgtggatcatgatgcgacgagaaaaaagagacaggaggcat tttaagaggatgcgttttcccccttttgatgatgaggagcctcccttggactatgctgac aacatcctagatgtcgagccattggaggccattcagctagaactggatcctgaggaggat gccccagtgttggattggttctatgaccaccagccattgagggacagcaggaagtatgtg aatggttccacttaccagcgctggcagttcacactgcccatgatgtccactctctaccgc ttggccaatcagctcctgacagacctggtagatgacaactacttttatttgtttgacctg aaggccttctttacctccaaggcactgaatatggctattcctggaggtcccaaatttgaa cctcttgttcgagacatcaacctacaggatgaagactggaatgagttcaatgatattaac aagatcatcatccgacagcctattcgtactgaatacaagattgcttttccttacttgtac aataatctcccacatcacgtccacctcacctggtaccacactcctaatgttgtgttcatc aaaaccgaggatcctgatttgccagctttctactttgatcccttgatcaacccaatatct catagacattcggtcaagagccaggagccgttgccagacgacgatgaggaatttgagctc ccagagtttgtggagcccttcctgaaggacacacccctctacacagacaacacagccaat ggcatcgccttgctctgggctccacggccttttaacctacgctctggacgcactcgccgg gccctggacataccccttgtcaagaattggtatcgggagcactgccctgctgggcagcct gtcaaggtgagagtctcctaccagaagctgctgaagtactatgtgctgaatgccttgaag caccgaccccctaaggcacaaaagaagaggtacctgtttcgctccttcaaagccaccaaa ttctttcagtccacaaaattggactgggtagaggtggggctgcaggtttgccgtcaggga tacaacatgctcaaccttctcattcaccgtaaaaacctcaattatctgcacctggactac aacttcaacctcaagccggtcaagacactcacaactaaggaaaggaagaaatctcgtttt gggaatgctttccacctgtgtcgggaagttctgcgattgactaagctggtggtggacagc catgtgcagtatcgactgggcaatgtggatgccttccagctggcagatggattgcagtat atatttgcccacgtgggacagctgacgggcatgtatcggtacaagtacaagctgatgcgg cagattcgcatgtgcaaggacctgaagcatctcatctactaccgcttcaacacgggccct gtcggcaagggccctggctgtggcttctgggctgcaggctggcgcgtctggctgtttttc atgcgtggcattactcctttgctggagcgatggctgggcaacctcctggctcggcagttt gaaggccgacactctaagggggtggcaaagacggtaacaaagcagcgtgttgagtcccat tttgacctggagcttcgggcggctgtgatgcatgacattctggacatgatgcctgagggg atcaaacagaacaaggcccggacaatcctgcagcacctcagtgaagcctggcgctgctgg aaggccaatattccctggaaggtccctgggctgccgacgcccatagagaatatgatccta cggtatgtgaaggccaaagctgattggtggaccaacaccgcccactacaaccgagaacgg attcgccgtggggctactgtagacaagactgtttgcaaaaagaacctgggccgtctcacc cggctctatttgaaggcagaacaagaacggcagcacaactacctgaaggatgggccttac atcacggcagaggaggcagtggccgtgtacaccaccactgtgcattggttggaaagccgc aggttctcgcccattccattccccccactgtcctacaagcatgacaccaagttgctcatc ttggccttggagcggctcaaggaagcttacagtgtgaagtctcggttgaaccagtctcag agggaggagctgggtctgatcgagcaagcctatgacaacccccacgaggcattgtctcgc atcaagcgtcacctcctcacacaaagagcctttaaagaagtgggcattgagttcatggat ctctatagccacctggtgcccgtgtacgacgtcgagcccctggagaagataaccgatgcc tacctggaccagtacctgtggtatgaagctgacaagcgccgcctcttcccgccctggatc aagcctgctgacacagagccccctccactgcttgtttacaagtggtgccaaggcatcaat aacctgcaggacgtgtgggagacgagtgaaggtgagtgcaatgtcatgctggaatcacgc tttgagaagatgtatgaaaaaatcgacttgaccctgcttaacaggctgctgcgactcatt gtggaccacaacatcgctgactacatgacagccaagaacaacgtcgtcatcaactataag gacatgaaccatacgaactcgtacggcatcatcagaggcctgcagtttgcctcgttcatt gtgcagtactatggcctggtgatggatttgctcgtgctgggattgcaccgggccagtgag atggctgggcccccacagatgccaaatgacttcctcagtttccaggacatagccactgag gccgcccaccccattcgtctcttctgcagatacattgatcgcatccacattttcttcagg ttcaccgcagatgaggctcgggacttgatccagcgttacctgacagaacatcctgacccc aacaacgagaacatcgttggctataataacaagaagtgctggccccgagacgcacgcatg cgcctcatgaaacatgatgttaacttgggccgtgcggtgttctgggacatcaagaaccgt ctgccacgatcagtgactacagttcagtgggagaacagcttcgtgtctgtgtacagtaag gacaaccccaacctgctcttcaacatgtgtggctttgagtgccgtatcctgcccaaatgc cgcaccagctacgaggagttcactcacaaggacggagtctggaacctacagaacgaggtc accaaggagcggacagctcagtgtttcctgcgtgtagatgatgagtcaatgcagcgcttc cataaccgcgtgcgtcagattctgatggcctctggctccaccaccttcaccaagattgtg aataagtggaatacagctctcattggcctcatgacatacttccgggaggctgtggtaaac actcaggaactcctggacttgctggtgaagtgtgagaacaagatccagacacgtatcaag attggactcaactctaagatgccaagtcggtttccccctgttgtgttctacacccccaag gagttgggtggacttggcatgctttcaatgggtcatgtgctcatcccccagtctgacctc aggtggtccaagcaaacagatgtaggtatcacacacttccgttcaggaatgagccatgaa gaggaccagctgattcccaacttgtaccgctacattcagccatgggagagcgagttcata gattctcagcgggtctgggctgagtatgcgctcaagagacaagaggccattgctcagaac agacggctgactttagaagatctggaagattcatgggatcgtggcattcctcgaatcaac actcttttccagaaggaccggcacacattggcttatgacaagggctggcgtgtccgaact gactttaagcagtaccaggttttgaagcagaaccctttctggtggacacaccagcggcat gatggaaagctctggaacctgaacaactaccgtacagacatgatccaggcccttggcggt gtggaaggcattctggaacatacactctttaagggcacttacttccctacctgggagggg cttttctgggagaaggccagcggctttgaggagtctatgaagtggaagaagctaaccaat gcccagcgatcaggattgaaccagattcccaatcgtagatttaccctctggtggtcccca accatcaaccgagccaatgtctatgtaggctttcaggtccagttggacctgacgggtatc ttcatgcacggcaagatccccacgctgaagatctctctcatccagatcttccgagctcac ttgtggcagaagatccatgagagcatcgttatggacttgtgtcaggtatttgaccaggaa ctggatgcactggaaatcgagactgtgcaaaaggagaccatccacccccggaagtcctat aagatgaactcttcctgtgcagatatactgctctttgcctcctataagtggaatgtctct cggccctcgttgctggcagactccaaggatgtgatggacagcaccaccactcagaagtat tggattgacatccagttgcgctggggggactatgattcccatgacatcgagcgctatgcc cgggccaagttcctggactacaccacagacaacatgagtatctacccttcacccacaggt gtgctcattgccattgacctggcctataacctgcacagtgcctatggaaactggttccca ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgcctta tacgtgttacgtgaacgcatccgcaaggggctgcagctctattcatctgagcccactgag ccttatctgtcctctcagaactatggtgagctcttctccaaccagattatctggtttgtg gatgacactaatgtctacagagtgacgatccacaagacctttgaaggaaacttgacaacc aagcccatcaatggggccatctttatcttcaacccacgcacagggcagctgttcctcaag ataatccacacatctgtgtgggctggacagaagcgtttggggcagttggctaagtggaag acagctgaggaggtggctgccctgattcgatctctgcctgtggaggagcagcccaagcag atcatcgtcaccaggaaaggcatgctggatccactggaggtgcacttgctggactttccc aatattgtgatcaaagggtcagagctccagctccccttccaggcttgtctcaaggtcgaa aagtttggggatctcatccttaaagccactgagccccagatggttctcttcaacctctat gatgactggctcaagactatttcatcctatacggctttttcacgtctcatcctgattctg cgtgccctgcatgtaaataatgaccgggcgaaggtgatactgaagccggacaagaccact atcacagaaccacatcacatctggcccactctgactgacgaggagtggatcaaggtggag gtgcagctcaaggaccttatcttggctgactacggcaagaaaaacaacgtgaacgtggcg tcactgacacagtctgagatccgcgacatcatcctgggtatggagatctcggctccatca cagcagcggcagcagatagctgagattgagaagcagactaaggagcagtcacagctgacg gcgacacagactcgcactgtcaacaagcatggcgacgagatcatcacttctaccaccagc aactatgagacccagactttctcgtcaaagactgagtggagggtcagggccatctctgca gccaacctgcacctgaggaccaatcacatctatgtttcatccgatgacatcaaggagact ggttacacctatatccttcctaagaatgtgcttaagaagttcatctgcatatctgacctt cgggcccaaattgcagggtatctgtatggagtgagcccaccggataacccccaggtgaag gagatccgctgcatcgtgatggtgccacagtggggcactcaccagaccgtgcacttgcct ggccagctgccccaacatgagtacctcaaggagatggagcctttaggttggatccacacc cagcccaatgagtccccccagttgtcaccccaggatgttaccacccatgccaagatcatg gctgacaacccatcttgggatggtgagaagaccattatcatcacctgcagcttcacacca ggctcctgcacgctgactgcctacaaactgacgcccagtggctatgaatggggtcgccaa aacacagacaagggcaacaaccccaaaggatacctgccttcgcactatgagagggtccag atgctgctgtcagaccgcttccttggcttttttatggtccctgcccagtcctcgtggaac tacaacttcatgggtgtccggcatgatcccaacatgaagtacgagctgcagctggcaaac cccaaggagttctaccatgaggtgcacagaccctcccacttcctcaactttgccctcctg caggagggggaggtctattctgccgaccgagaggacctctatgcctag

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