Tupaia chinensis (Chinese tree shrew): 102493543 Help Entry 102493543         CDS       T02978                                  Symbol VPS11 Name (RefSeq) VPS11, CORVET/HOPS core subunit   KO K20179   vacuolar protein sorting-associated protein 11 Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup04140   Autophagy - animal tup04142   Lysosome biogenesis tup04148   Efferocytosis tup05132   Salmonella infection Brite KEGG Orthology (KO) [BR:tup00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     102493543 (VPS11)    04140 Autophagy - animal     102493543 (VPS11)    04148 Efferocytosis     102493543 (VPS11)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     102493543 (VPS11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tup04131]     102493543 (VPS11) Membrane trafficking [BR:tup04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     102493543 (VPS11)    Hops complex     102493543 (VPS11) SSDB OrthologParalogGFIT Motif Pfam:  PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C VPS18_solenoid_2nd Clathrin zf-C3HC4_2 zf-RING_2 TPR_Vps41 zf-C3HC4 zf-rbx1 TPR_GEMI5 Beta-prop_WDR3_1st zf-C3H2C3 Beta-prop_IFT122_1st zf-RING_UBOX zf-RING_5 Beta-prop_WDR36-Utp21_1st DUF1993 zf-RING_11 zf-HC5HC2H VPS18_solenoid_1st zf-ANAPC11 zf-C3HC4_3 zf_RING_Vps8_fungal Rv0250c zf-RING-like DUF5847 DLP_helical Motif Other DBs NCBI-GeneID:  102493543 NCBI-ProteinID:  XP_006152363 LinkDB All DBs Position Un AA seq 941 aa AA seqDB search MAAYLQWRRFVFFDKELVKEPLGNDGAAPGAAPASGPAASKFFCLPPGITVCDSGRGSLV FGDMEGQIWFLPRSLQLTNFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ ILHRGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTS RDSQSSDKQLLNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ AESNMKRYGKILMHHIPEQTTQLLKGLCTDYRPSLEGRGDREAPSCRANSEEFIPIFANN PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEKLHAEAISLLKSGRFC DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERHGEQDPSLW EQALSYFARKEEDCKEYVAAVLKHIETKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD YFGRGVFNKLTLLTDPPTARLTPSLEAGLQRDLLMHSRRGT NT seq 2826 nt NT seq  +upstreamnt  +downstreamnt atggcggcctacctgcagtggcggcgcttcgtcttctttgataaggagctggtgaaggag cccctgggcaatgatggggccgctcccggggccgcgcctgcctctggacccgctgcttcc aagttcttttgtctccctcctggcatcactgtctgcgactccggccgaggaagcctggtc ttcggagatatggaaggccagatctggttcttgccacgctccttacagcttacaaacttc caggcctacaaactacgcgtgacgcacttgtaccagctgaagcagcacaatattctggca tctgttggtgaggatgaagagggcatcaatcccctggtaaagatctggaacctggagaag agagatggtggtaatccactctgcacgcgaatcttccctgccatcccaggaacagagcca acagtcgtgtcttgtttgactgtccatgaaaatctcaactttatggccattggtttcacg gatggcagtgtcacgctgaacaaaggagacatcactcgagaccgccacagcaagacccag atcttgcacaggggcaattatcccgttaccggactggcctttcgccaagcgggaaagacc actcacttgtttgttgtgacaacggagaatgtccagtcgtacatagtttctggaaaggac taccctcgtgtggagttggacacccacggctgtggcctgcgctgctcggcactaagcgac ccttctcaggacctgcagttcattgtggctggagacgagtgtgtctatctgtaccagcct gatgaacgtgggccctgcttcgcctttgagggccataagctcattgctcattggtttaga ggctacctcgtcattgtctcccgtgaccggaaggtttctcccaagtcagagtttaccagc agggactctcagagctccgacaagcagctccttaacatctatgacctgtgcaacaaattc atagcctacagcgccgtcttcgaggatgtagtggatgtgcttgctgagtggggctccctg tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacccagaccaaa ctggagatgctgtttaagaagaacctctttgagatggcaattaatctggccaagagccag catctggacagtgatgggctggcccagatcttcatgcagtatggagaccatctctacagc aagggcaaccacgatggggccgtccagcagtacatccgtaccattgggaagctggagcca tcctacgtgatccgcaagttcctggacgcccagcgcatccacaacctgactgcctacctg cagaccctgcaccgacagtccctggccaacgccgaccacaccaccctgctcctcaactgc tacaccaagctcaaggacagctcgaagctggaggagttcatcaagacgaagagtgagagt gaagtccactttgacgtggagacagccatcaaggtcctccggcaggctggctactactcc catgccctctacctggctgagaaccatgcccatcacgagtggtacttgaagatccagctc gaggacattaagaattaccaagaagccctccggtacatcggcaagctgcctttcgagcag gcagagagcaacatgaagcgctatggcaagatcctcatgcaccacataccagagcagacc acccagctgctgaagggactctgcaccgactatcggcccagcctggaaggccgaggcgat cgggaggctcccagttgcagggccaactctgaggagttcatccccatctttgccaacaac ccgcgagagctgaaagccttcctggagcacatgagtgaggtgcagcccgactcgccccag ggcatctacgacacactgctggagctgcggctgcagaactgggcccatgagaaggacccg caggtcaaagagaagcttcacgcagaggccatctccctgctaaagagcggccgcttctgt gacgtcttcgacaaggccttggtcctgtgccagatgcacgacttccaggatggcgtcctt tacctctatgagcaggggaagctgttccagcagatcatgcattaccacatgcagcacgag cagtaccggcaggtgatcgccgtgtgcgagcgccatggggagcaggacccttccctgtgg gaacaggccctcagctacttcgcccgcaaggaggaggactgcaaggagtacgtggcagct gtgctcaagcacatcgagaccaagaacctcatgccaccccttttagtggtgcagaccctg gcccacaactccacagccaccctgtccgtcatcagggactacctggtccaaaaactgcag aaacagagccagcagattgcgcaggacgagctgcgggtgcggcggtaccgtgaggagacc actcggatccgccaggagattcaggagctcaaggcgagtccaaagatcttccagaagacc aagtgcagcatctgtaacagtgccttggagttgccgtcggtccacttcctgtgtggccac tccttccaccagcactgctttgagagctactcagaaagtgatgctgactgccccacctgc ctccctgaaaaccgcaaagtcatggatatgatccgggcccaggaacagaagcgagatctt catgatcagttccagcaccagctcaagtgctccaatgacagcttctctgtgatcgctgac tactttggccgaggtgttttcaacaaactgaccctgctgactgaccctcccacggcccgg ctgaccccgagcctggaggccgggctgcagcgggacctgctcatgcactccaggaggggc acttaa

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