Tupaia belangeri chinensis (Chinese tree shrew): 102494230
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Entry
102494230 CDS
T02978
Symbol
LHX5
Name
(RefSeq) LIM homeobox 5
KO
K18493
LIM homeobox protein 5
Organism
tup
Tupaia belangeri chinensis (Chinese tree shrew)
Pathway
tup04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102494230 (LHX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tup03000
]
102494230 (LHX5)
Transcription factors [BR:
tup03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
102494230 (LHX5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
102494230
NCBI-ProteinID:
XP_006151758
LinkDB
All DBs
Position
Un
AA seq
525 aa
AA seq
DB search
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIRAQLRKRRHSAQFLRWCAGQTDSQGPAPKLG
ARGQSQARREAFIKPSGRGQVEGQEAGVFMSRPTGPRNPSPLAGSGEAPLLPSRPNPARP
PPQGSPGAVEALGPSGGGRAGRGRKAPLTPSLQPCVLSQVWFQNRRSKERRMKQLSALGA
RRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGPPSQAQS
PADSSFLAAWGAGPAPPGAPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGALHPMPGEV
FSGGPRPCLLGQELWEEELHPAPPGAEKHGYFHFADEETEARGAK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggttgcgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcacatcaaatgcgttcagtgctgtgagtgcaaaaccaacctctcg
gagaagtgcttctcgcgcgagggcaagctctactgcaaaaatgacttcttcaggcgcttt
ggcaccaagtgcgctggctgcgcgcaaggcatctctcccagcgacctggtgcgcaaggct
cggagcaaagtcttccacctcaactgcttcacctgcatggtgtgtaacaagcagctgtcc
accggcgaggagctctacgtcatcgacgagaacaagttcgtgtgcaaggacgactacctg
agctcctccagcctcaaggagggcagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtccccggacctccaggacccactgcaggacgaccccaaggagaccgataactcgacc
tcgtcggataaggagaccgccaacaacgagaacgaagagcagaactctggcaccaagcgg
cgcggcccgcgcaccaccattaaagccaagcagctggagacgctcaaggccgccttcgcc
gccacgcccaagcccacgcgccacatccgcgcgcagctgagaaagaggcgacattctgca
caattcttgcgctggtgcgcggggcagacagacagtcagggcccggctccgaagctgggg
gcccgtggccagagccaggccaggcgggaggcctttataaagccgtcaggccgcgggcaa
gtcgagggacaggaagccggagtctttatgagtcgccccacgggcccgcgaaatccttca
cccttggctggttcgggcgaggcccctctcctcccttcccggcctaatccggcccggccc
ccgcctcaggggagtcctggtgctgtagaggctctaggacccagcgggggtggccgggcg
gggaggggaaggaaggcacccctgaccccaagtttacagccctgtgttctgtcccaggta
tggtttcagaaccgacggtccaaagaacgccggatgaaacagctgagcgcactgggcgct
cggagacacgccttcttccggagtccgcggcgcatgcgtccactgggaggccgcctggac
gaatctgaaatgttggggtccaccccatacacctactacggagactaccaaggcgactac
tacgcgccggggggcaactacgacttcttcgcgcacggcccgccgtcgcaggcgcagtcc
ccggccgactcgagcttcctggctgcctggggggccggccccgccccgcccggggccccg
ccgctcgccggcccgcacgccgccgacaaccccaggttcaccgacatgatctcgcacccg
gacacgccgagccccgagccggggctgccgggcgcgctgcaccccatgccgggcgaggtg
ttcagcggcgggcccaggccgtgcctgctgggccaggagctctgggaggaggagctccac
ccggccccaccaggcgctgaaaaacacggttatttccactttgcagatgaggagaccgag
gcccgaggggcaaagtga
DBGET
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