Tupaia chinensis (Chinese tree shrew): 102494257
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Entry
102494257 CDS
T02978
Symbol
LSM1
Name
(RefSeq) LSM1 homolog, mRNA degradation associated
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102494257 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102494257 (LSM1)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102494257 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
102494257 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
102494257
NCBI-ProteinID:
XP_014440556
LinkDB
All DBs
Position
Un
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTRLEAEKLKVRALKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcaccgccagcctcatcgaggacatcgacaaaaagcacttggtc
ctgcttcgagacggaaggacacttataggctttttaaggagcatcgatcagttcgctaac
ttagtgctgcatcagactgtggaacgtattcatgtgggcaaaaagtacggtgacattcca
cgagggatttttgtggtcagaggagaaaatgtggtcctactaggagaaatagatttggag
aaggagagtgacacgcccctgcagcaggtgtccattgaagagatcctggaggagcagagg
gtggagcagcagaccaggctggaagcagagaagctgaaagtgcgggcgctcaaggaccgc
ggcctctccatcccccgagcagacaccctggacgagtactga
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integrated database retrieval system
