Tupaia chinensis (Chinese tree shrew): 102494355
Help
Entry
102494355 CDS
T02978
Symbol
TRUB1
Name
(RefSeq) TruB pseudouridine synthase family member 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tup03016
]
102494355 (TRUB1)
Enzymes [BR:
tup01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
102494355 (TRUB1)
Transfer RNA biogenesis [BR:
tup03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102494355 (TRUB1)
Prokaryotic type
102494355 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
102494355
NCBI-ProteinID:
XP_006165181
LinkDB
All DBs
Position
Un
AA seq
348 aa
AA seq
DB search
MAAAADGTVALSSSLKTDTASVLETAGTAAATAAKAPRAAAAVTATARTGSDAPVSKAAL
ATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLD
SAAQGVLVVGIGRGTKMLTGMLSGSKRYVAVGELGKATDTLDSTGKVTEEKPYDKITQED
IENILQKFTGNIMQVPPLYSALKKDGQRLSTLVKRGEVVEAKPARPVTVYSISLEKFEPP
FFTLDVECGGGFYIRSLVSDIGKELASCASVLELTRTKQGPFSLEHALPEDRWTIADIAQ
SLQHCTAPLPPELALKKQKPEESNERVLSCDYITLNESKGGGDVIKTS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgcggatgggacggtggcgttgtcatcgtctttgaaaacagacacagcc
tcagtccttgaaactgcagggacagctgcggccacggctgcgaaggcgccacgggcagcc
gcagcagtaacggccacggccaggaccggatccgacgcccctgtctccaaggccgctttg
gctactaagctgctatccctgagcggcgtgttcgccgtgcacaaacccaaagggcccact
tcagccgagctgctgaatcggttgaaggagaagctgttggcagaagctgggatgccttct
ccagaatggaccaagaggaaaaagcagactttgaaaattgggcatggaggaactctggac
agtgcagcccaaggagttctggtggttggaatcggaaggggaactaaaatgttgactggt
atgctgtcagggtccaagcgctacgttgctgttggagaactggggaaagctaccgacacg
ctggattccacagggaaagtaacggaagaaaaaccttacgataaaataacacaagaagat
attgaaaacattcttcagaaatttactgggaatataatgcaagtaccccctctctattct
gcattaaagaaagatggacagagactttcaactttggtgaaaagaggtgaagtagtagaa
gcaaaacctgccaggcctgttaccgtatatagtatttctcttgaaaaatttgagccaccg
tttttcacattggatgttgaatgtggaggaggtttttacatcaggagcttggtcagtgac
attggcaaagaacttgcttcctgcgccagcgtactagagctgacccgaaccaagcaggga
ccgttttcactagaacatgcccttcctgaagacagatggacgattgctgacatcgcacag
tctcttcagcactgcacagctcctctcccaccagagttggcactgaaaaaacaaaaaccc
gaggagtctaatgaacgggttttgagctgtgactacataaccctaaatgagtcaaaggga
ggaggtgatgtaattaagacatcttga
DBGET
integrated database retrieval system
