Tupaia chinensis (Chinese tree shrew): 102494838
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Entry
102494838 CDS
T02978
Symbol
SPATA13
Name
(RefSeq) spermatogenesis associated 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102494838 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tup04131
]
102494838 (SPATA13)
Membrane trafficking [BR:
tup04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102494838 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
102494838
NCBI-ProteinID:
XP_006159591
LinkDB
All DBs
Position
Un
AA seq
1265 aa
AA seq
DB search
MNQAAQWPQVPGPRNMTTAQNGLGSGAAATSSISDPRDPKMVTSPVCQNGGSSSPNGDTE
TQETRASPSKLVRLFSVNRKXXXXXXXXXXANPERPRSVVLVGHSSTWNALASFRKMGSF
KKLKSTVLQGIQNREGSGAAWKEEASEQDVGKPVLNGVTGAQASRLSMLGQAGDGGASDC
SDPEEADDAFQRSTHRSRSIRRAYGLGRISILDPDRRHGLQNPPRPLSSVQEPTMCEILV
KDSENNSVLYRRSKSTDNLNFLKKSSFKRKSTSNLADLRAATDKQAPQRTLSSSSADFEK
PGGAERRSKRWKSPIRAKDFDRVLKLVSNVTDAAWKRESPKSGAQAPGEAHLRLRLHSRL
HDDYSRRVSSSSEQDRRRGAASSLSSAPSQGMDTDTAVFPLEAKSSQASESVGPSASSSS
PSPVAPDALSKDSNEPNTGSQFTFDPEQLPTPLRPTTPKPQSPQSPQSPGAGSTKCPNNQ
SALSLSSVESEERAEDSAPREPGPVSSQDSVHTTCSDEDSGSYPQLSLVPASSPEDKKEE
VVTDDPWRRGSSQDEERTEAQRITRRRWGSGRRSRPRPLSDYGQLASRSLSIPEDSIAID
PRDEDCVDGDHQASMTTGPAGQDTIPGCPRAGRRRRPISVIGGVSFYGNNQTEEIENLLT
QPAARPPVPAHQVPPYKAVSARLRPFTFSQSTPIGLDHVGRRRQMRASNISSDGGTESSA
LADDNGSEEDFSYEDLCQANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELG
FKAGDVIQVLEASNKDWWWGRNEHKEAWFPASFVRLRVNQEELSENSSSSHSEEQEEDAS
KTRHKHSENKHQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFG
NIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACLELSN
LMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNI
KAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGMDILDRSSELIHSGELTRVTK
QGKSQQRTFFLFDHQLVSCKKDLLRRDMLYYKGRMDMDEMELVDLEDGRDKDWNLSVKNA
FKLVSRTSDEAHLFCAKKQEDKARWLQACVDERRRVQEDQEMGMEISENQKKLAMLNAQK
AGHGKSKGYSGCPVAPPHQGLHPIHQRHVTVPTSIPQQQVFALAEPKRKPSLFWHTFNKL
TPFRK
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggctgcccagtggccacaggtacccggccccaggaacatgacaacagctcag
aatggccttgggtcaggagctgcagccacctcttctatctctgatccgagggaccccaag
atggtaacttccccagtgtgtcagaacggagggtccagcagccctaatggcgatacggaa
acccaggaaaccagagcgagcccttccaagctcgtgcgtctgttctctgtgaatcggaag
nnnnnnnnnnnnnnnnnnnnnnnnnnnnntgccaacccagagaggccccgctctgtggtc
ctggtgggacattcctccacttggaacgcccttgcctccttccggaaaatgggatctttt
aaaaagttgaagtctacagttctgcagggaattcagaaccgggaggggtcaggtgctgcc
tggaaggaggaggcttcggaacaggatgtggggaaacccgtcctcaacggtgtcaccgga
gcgcaggccagcaggctctccatgctaggacaggccggggacggtggcgcatccgactgc
tccgaccccgaggaggctgacgacgccttccagcgcagcacccaccgctcccgcagcatc
cgcagggcctacggcctgggccgcatcagcatcctggacccagacagacgtcacggtctc
cagaacccccccagacccctgtcctcagtacaggagccaaccatgtgtgaaattctggtg
aaggactctgaaaacaacagcgtcctctaccggaggagcaagagcaccgacaacttaaac
ttcctcaagaagagctccttcaaacggaagtccacctcgaatctcgcagacctcagagca
gccactgacaagcaagcgccccagaggaccctaagcagctcctctgcagacttcgagaag
ccaggtggggctgaaagaaggtcaaagcgctggaagagccccatcagggccaaggacttc
gacagagtcttgaaacttgtcagcaatgtgacagacgctgcctggaagagggagagtccc
aagagtggggcccaggcccctggcgaggcccacctgaggctccgactgcacagcaggctg
catgatgactactcacgccgggtgtccagcagctccgagcaggacagaaggcgaggcgcg
gcctccagcctcagctcagccccttctcagggcatggacacggacacagccgtcttccct
cttgaagccaaaagctcccaggcatcagaaagtgtgggtcctagtgccagcagctcctca
cccagtccagttgctccagatgccttgagcaaagactccaatgaaccaaacactggcagc
cagtttacctttgacccagaacaactgcccacccctctaagacccaccacgcccaagccc
cagagcccccagagcccccagagcccaggggcaggaagcaccaagtgccccaacaatcag
agtgcattgtccctgagttcagtggaaagtgaagaaagggcagaggactctgcaccgagg
gagccagggcccgtgtcctcccaggattcggtgcacaccacatgcagtgacgaggacagt
ggcagctaccctcagctgagccttgtcccagcatcgagtcccgaagacaagaaggaggag
gttgttactgatgacccgtggaggcgaggctcatcacaggatgaagaaaggacagaggcc
cagagaatcaccaggaggaggtggggttctgggagacgctccaggcctcggccgctctcg
gactatggccagctggccagccgaagcttgtctattcctgaagactccattgctatcgac
ccccgggatgaggactgtgtggatggagaccaccaggccagcatgaccacaggccctgca
ggccaggacactatcccaggctgccctagagcaggccggagaagacgccccatttccgtg
ataggaggggtcagcttctatgggaacaaccagacagaggagatagagaatcttctcacc
caaccggcagccaggccgcctgtgcctgctcaccaggtgccaccctacaaagccgtgtcg
gcccggctccggcccttcacgttttctcagagcacccccatcgggctggaccacgtggga
cgccggcggcagatgcgagcatccaacatttcttcagatggagggacggagtcctctgcc
ttagccgacgacaacggcagcgaggaggacttcagctatgaggatctctgccaggccaac
cctcggtacctacagccaggtggggagcagctggccatcaacgagctcatcagcgatggc
agcgtggtctgcgcagaggccttgtgggaccatgtgactatggacgaccaagagctgggc
ttcaaggctggggatgtcatccaggttctagaagcctctaacaaggactggtggtggggc
cggaatgagcacaaggaagcctggtttccagcaagctttgtccgactgcgagtcaatcag
gaagagctgtcggagaattccagcagctcccacagtgaggagcaggaggaagatgccagc
aaaacccgccacaaacactcagagaacaagcatcagatgaggacgaacgtcatccaggag
atcatgaacactgagcgggtgtacatcaagcacctgaaggatatctgtgagggctatatc
cgacagtgtcgcaagcacacggggatgttcactgttgcacagctagccactattttcgga
aatattgaagacatttacaaattccaaaggaagttcctgaaagaccttgagaaacagtac
aataaagaggagccccacctaagtgagataggatcctgctttcttcaacaccaagagggc
tttgccatctactccgagtactgcaacaaccaccctggcgcctgcctggagctctccaac
ctcatgaagcagggcaagtacaggcacttcttcgaggcctgccgcctgctgcagcagatg
atcgacatcgccatcgacggcttcctcctgacgcccgtgcagaagatctgcaagtacccc
ctgcagctggccgagctgctcaagtacaccacacaggagcacagtgattacagcaacata
aaggcagcgtatgaggccatgaagaacgtagcctgtttgatcaacgagcgcaaacgtaag
ctggagagcatagacaagatagctcgctggcaggtgtccatcgtaggctgggagggaatg
gatattttagacagaagctcagagttgattcattctggagaactgaccagagtcactaaa
caaggcaagagccagcagcggacgttcttcctgtttgaccatcagctggtgtcctgcaag
aaggacctgctgcgcagggacatgctctactacaagggccggatggacatggacgagatg
gagctcgtggacctggaggatgggcgtgacaaggactggaacctcagtgtgaagaatgcc
ttcaagctcgtcagtaggacctctgacgaggctcatctgttttgtgccaaaaaacaagaa
gacaaggcaaggtggctgcaggcctgtgtggacgagaggaggcgggtgcaggaggaccag
gagatgggcatggaaatttcagaaaatcagaagaaactcgccatgttgaatgctcaaaag
gcaggacatggaaagtcaaaaggctacagcgggtgccctgtggccccaccacaccagggc
ctgcatccaatccaccagcgccacgtcaccgtgcccaccagtatcccccagcaacaggtc
tttgccctggcagagccaaagaggaagccctcgctcttttggcacaccttcaacaaactc
accccttttaggaagtga
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