KEGG   Tupaia chinensis (Chinese tree shrew): 102495414
Entry
102495414         CDS       T02978                                 
Symbol
ATXN2L
Name
(RefSeq) ataxin 2 like
  KO
K23625  ataxin 2/2L
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup05014  Amyotrophic lateral sclerosis
tup05017  Spinocerebellar ataxia
tup05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:tup00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102495414 (ATXN2L)
   05017 Spinocerebellar ataxia
    102495414 (ATXN2L)
   05022 Pathways of neurodegeneration - multiple diseases
    102495414 (ATXN2L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102495414 (ATXN2L)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102495414 (ATXN2L)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 DUF5415
Other DBs
NCBI-GeneID: 102495414
NCBI-ProteinID: XP_006148295
LinkDB
Position
Un
AA seq 1044 aa
MSNEVTGLGYGGDIPPFRVWGVKVAGHDCLDYLGDDVPARGQSTGKGPPQSPVFEGVYNN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAK
TLSSPNSRPSGETSVPSPPAALPFLPVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTS
SASIPVTSSVVDPGVGSISPASPKISLAPTDVKELATKEPGRTLEPQELARIAGKVPGLQ
NEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPSRILKEEAKGKEKEVDGLLNSEPMGS
PVSSKTESVSDKEDKPPLATAGGTEGPEQPPPPCPSQTGSPPVGLIKGDDKDEGPVAEQV
KKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYI
PQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAA
GPPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAI
VSSSTPQYPSAEQPTPQALYATVQQSYPHHATQLHGHQPQPATTPPGSQPQSQHAAPSPV
QHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAPQQL
PHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPAL
SASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPSS
LSCDPAAPLPTASPALSDPDCLLT
NT seq 3135 nt   +upstreamnt  +downstreamnt
atgagtaatgaggtcacaggtctaggctatggaggggatattcctcctttcagggtttgg
ggcgttaaggttgctggacatgattgtcttgactatttgggagatgatgtgcctgctagg
ggacagagcacaggaaagggacccccacagtcaccggtattcgaaggtgtttacaacaac
tccagaatgctgcacttccttacagctgttgtgggctctacttgtgatgtaaaggtgaaa
aatggcaccacttatgagggtatcttcaagactctgagctcaaagtttgaactagcagta
gatgctgtgcaccggaaagcatcggagccagcaggtggccctcgccgagaagacattgtg
gacaccatggtatttaagccaagcgatgtcatgcttgtccatttccgaaatgttgacttc
aattatgctactaaagacaagttcactgattcagccattgccatgaactcgaaagtgaat
ggggagcacaaagagaaggtgcttcagcgctgggaggggggcgacagcaacagcgacgac
tacgacctcgagtctgacatgtccaatggctgggaccccaatgagatgttcaagttcaac
gaggagaactatggcgtgaagaccacctatgatagcagtctctcctcttacaccgtgcca
ttagaaaaggacaactcagaagagtttcgacagcgagagctgcgtgcggcccagctggcc
cgagagatcgagtcgagtccccagtaccgcctgcggatcgccatggagaacgacgacggg
cgcactgaagaggaaaagcacagtgcagtgcagcggcaggggtcagggcgggagagcccc
agcttggcctccagggaggggaagtacatccctctgcctcaacgcgttcgggaaggcccc
cggggaggagtccgatgcagcagttctcggggcggccgacctggacttagctctttgcca
cctcgtggcccgcaccatcttgacaatagcagccctggccccggttctgaggcacgtggg
atcaatggaggcccttctcgcatgtcccctaaggcacagcggcctctgagaggcgccaag
actctatcttcacccaacagcaggccttccggagaaacttcggttccatctcctcccgca
gctctcccttttcttccagtgggtcggatgtaccctccacgctctcccaagtctgctgcc
cctgccccaatctcagcttcctgtcctgagcctcccatcggctcggcagtgccaacctct
tctgcctccatccctgtgacatcgtcagttgtggatcctggagtgggctctatttcccca
gcttctccaaagatctcactggcccccacagatgtaaaggaacttgcgaccaaggagcct
gggagaactctggagccccaggaactggcccggatagctggaaaagtcccaggccttcag
aacgaacagaaacgatttcagctagaagaactgaggaagtttggggcccagtttaagctt
cagcctagtagctcccctgagaccagcctggatccttttccttcccggatcttaaaggaa
gaggccaaagggaaagaaaaggaagttgatggtctgttgaattcagagcccatgggatcc
ccggtctcctccaagacagagtccgtatcggataaggaggacaaaccacccctggcaaca
gcaggaggcactgaggggccagagcagcccccaccaccttgcccaagccaaactggcagc
ccccccgtgggcctcatcaagggagatgacaaggacgaaggccccgttgctgaacaagta
aagaagtcaacgttgaaccccaatgccaaggagttcaaccccacaaagcctctgctgtct
gtgaacaaatccaccagtaccccaacttctccggggccccggactcattcaactccctcc
atcccggtgctgacggcaggccagagtgggctctacagcccgcagtacatctcttacata
cctcagatccacatgggaccagctgtgcaggcacctcagatgtatccatatcctgtatcc
aactcggtgcctgggcagcagggcaagtaccggggagcaaaaggctccctgcccccacag
cgctcggaccaacaccagccagcttcagcccctccgatgatgcaggccgctgctgctgct
ggtcctcctctggtggctgccacaccttactcttcctacatcccctacaaccctcagcag
ttcccgggccagcctgccatgatgcagcccatggcccactacccctcacagccggtgttt
gcccccatgcttcaaagcaatccacgcatgctgacgtcgggtagccatccccaggccatc
gtgtcatcctccacccctcagtacccttctgcagagcagcccaccccccaagccctctac
gccactgttcagcagtcctacccgcaccatgccacgcagctccatggccaccagccgcag
ccggccaccacgccccctgggagccagccgcagtcccagcatgcggcccccagtcctgtc
cagcatcaggcggggcaggccccacacctgggcagtggacagccacagcagaatctgtac
cacccaggggccctgacaggcacgccaccctctctgccaccgggaccttctgcccagtcc
cctcagagcagctttccccaaccagcagctgtgtatgccatccatgccccccagcagcta
ccccacggcttcaccaacatggcccatgttacccaggcccatgtccaaactggaatcaca
gcagccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcaccca
ccccagagccatggggggcccccccaaggcgcggtgccccagagtggggtgcctgcactc
tcagcttccacaccctcaccctacccctacatcggacacccccaaggtgagcagcctggc
caggcgcctggatttccaggaggagccgatgacaggattctatgtagggtgggcagaagc
cacagtcgccgccgccaggggcttgctcctggctctgtcctttgcttccctccgtcctcg
ctcagttgtgatccagcagcccccctccccactgcctccccagctctcagtgaccccgac
tgtctcctgacttag

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