Tupaia chinensis (Chinese tree shrew): 102495414
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Entry
102495414 CDS
T02978
Symbol
ATXN2L
Name
(RefSeq) ataxin 2 like
KO
K23625
ataxin 2/2L
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup05014
Amyotrophic lateral sclerosis
tup05017
Spinocerebellar ataxia
tup05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102495414 (ATXN2L)
05017 Spinocerebellar ataxia
102495414 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
102495414 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102495414 (ATXN2L)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102495414 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
102495414
NCBI-ProteinID:
XP_006148295
LinkDB
All DBs
Position
Un
AA seq
1044 aa
AA seq
DB search
MSNEVTGLGYGGDIPPFRVWGVKVAGHDCLDYLGDDVPARGQSTGKGPPQSPVFEGVYNN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAK
TLSSPNSRPSGETSVPSPPAALPFLPVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTS
SASIPVTSSVVDPGVGSISPASPKISLAPTDVKELATKEPGRTLEPQELARIAGKVPGLQ
NEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPSRILKEEAKGKEKEVDGLLNSEPMGS
PVSSKTESVSDKEDKPPLATAGGTEGPEQPPPPCPSQTGSPPVGLIKGDDKDEGPVAEQV
KKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYI
PQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAA
GPPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAI
VSSSTPQYPSAEQPTPQALYATVQQSYPHHATQLHGHQPQPATTPPGSQPQSQHAAPSPV
QHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAPQQL
PHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPAL
SASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPSS
LSCDPAAPLPTASPALSDPDCLLT
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgaggtcacaggtctaggctatggaggggatattcctcctttcagggtttgg
ggcgttaaggttgctggacatgattgtcttgactatttgggagatgatgtgcctgctagg
ggacagagcacaggaaagggacccccacagtcaccggtattcgaaggtgtttacaacaac
tccagaatgctgcacttccttacagctgttgtgggctctacttgtgatgtaaaggtgaaa
aatggcaccacttatgagggtatcttcaagactctgagctcaaagtttgaactagcagta
gatgctgtgcaccggaaagcatcggagccagcaggtggccctcgccgagaagacattgtg
gacaccatggtatttaagccaagcgatgtcatgcttgtccatttccgaaatgttgacttc
aattatgctactaaagacaagttcactgattcagccattgccatgaactcgaaagtgaat
ggggagcacaaagagaaggtgcttcagcgctgggaggggggcgacagcaacagcgacgac
tacgacctcgagtctgacatgtccaatggctgggaccccaatgagatgttcaagttcaac
gaggagaactatggcgtgaagaccacctatgatagcagtctctcctcttacaccgtgcca
ttagaaaaggacaactcagaagagtttcgacagcgagagctgcgtgcggcccagctggcc
cgagagatcgagtcgagtccccagtaccgcctgcggatcgccatggagaacgacgacggg
cgcactgaagaggaaaagcacagtgcagtgcagcggcaggggtcagggcgggagagcccc
agcttggcctccagggaggggaagtacatccctctgcctcaacgcgttcgggaaggcccc
cggggaggagtccgatgcagcagttctcggggcggccgacctggacttagctctttgcca
cctcgtggcccgcaccatcttgacaatagcagccctggccccggttctgaggcacgtggg
atcaatggaggcccttctcgcatgtcccctaaggcacagcggcctctgagaggcgccaag
actctatcttcacccaacagcaggccttccggagaaacttcggttccatctcctcccgca
gctctcccttttcttccagtgggtcggatgtaccctccacgctctcccaagtctgctgcc
cctgccccaatctcagcttcctgtcctgagcctcccatcggctcggcagtgccaacctct
tctgcctccatccctgtgacatcgtcagttgtggatcctggagtgggctctatttcccca
gcttctccaaagatctcactggcccccacagatgtaaaggaacttgcgaccaaggagcct
gggagaactctggagccccaggaactggcccggatagctggaaaagtcccaggccttcag
aacgaacagaaacgatttcagctagaagaactgaggaagtttggggcccagtttaagctt
cagcctagtagctcccctgagaccagcctggatccttttccttcccggatcttaaaggaa
gaggccaaagggaaagaaaaggaagttgatggtctgttgaattcagagcccatgggatcc
ccggtctcctccaagacagagtccgtatcggataaggaggacaaaccacccctggcaaca
gcaggaggcactgaggggccagagcagcccccaccaccttgcccaagccaaactggcagc
ccccccgtgggcctcatcaagggagatgacaaggacgaaggccccgttgctgaacaagta
aagaagtcaacgttgaaccccaatgccaaggagttcaaccccacaaagcctctgctgtct
gtgaacaaatccaccagtaccccaacttctccggggccccggactcattcaactccctcc
atcccggtgctgacggcaggccagagtgggctctacagcccgcagtacatctcttacata
cctcagatccacatgggaccagctgtgcaggcacctcagatgtatccatatcctgtatcc
aactcggtgcctgggcagcagggcaagtaccggggagcaaaaggctccctgcccccacag
cgctcggaccaacaccagccagcttcagcccctccgatgatgcaggccgctgctgctgct
ggtcctcctctggtggctgccacaccttactcttcctacatcccctacaaccctcagcag
ttcccgggccagcctgccatgatgcagcccatggcccactacccctcacagccggtgttt
gcccccatgcttcaaagcaatccacgcatgctgacgtcgggtagccatccccaggccatc
gtgtcatcctccacccctcagtacccttctgcagagcagcccaccccccaagccctctac
gccactgttcagcagtcctacccgcaccatgccacgcagctccatggccaccagccgcag
ccggccaccacgccccctgggagccagccgcagtcccagcatgcggcccccagtcctgtc
cagcatcaggcggggcaggccccacacctgggcagtggacagccacagcagaatctgtac
cacccaggggccctgacaggcacgccaccctctctgccaccgggaccttctgcccagtcc
cctcagagcagctttccccaaccagcagctgtgtatgccatccatgccccccagcagcta
ccccacggcttcaccaacatggcccatgttacccaggcccatgtccaaactggaatcaca
gcagccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcaccca
ccccagagccatggggggcccccccaaggcgcggtgccccagagtggggtgcctgcactc
tcagcttccacaccctcaccctacccctacatcggacacccccaaggtgagcagcctggc
caggcgcctggatttccaggaggagccgatgacaggattctatgtagggtgggcagaagc
cacagtcgccgccgccaggggcttgctcctggctctgtcctttgcttccctccgtcctcg
ctcagttgtgatccagcagcccccctccccactgcctccccagctctcagtgaccccgac
tgtctcctgacttag
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