KEGG   Tupaia chinensis (Chinese tree shrew): 102495676
Entry
102495676         CDS       T02978                                 
Symbol
WDR43
Name
(RefSeq) WD repeat domain 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102495676 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tup03009]
    102495676 (WDR43)
Ribosome biogenesis [BR:tup03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    102495676 (WDR43)
SSDB
Motif
Pfam: Utp12 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_ACSF4 EIF3I DSE1_N Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR75_1st UTP15_C Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_WDR41 Tricorn_2nd DUF6235 ASA1 Beta-prop_NOL10_N Zip NBCH_WD40 WD40_like Raftlin
Other DBs
NCBI-GeneID: 102495676
NCBI-ProteinID: XP_006162185
LinkDB
Position
Un
AA seq 676 aa
MAAGGGGGRDPLAPAGVPCAFSPQSQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKESPQRKKRKSEAIGTGDQIDLLALGTAVGSILLYSTVKGELHSKL
ISGGHDNRVNCIQWHQDGGCLYSCSDDKHIVEWNIQTCKVKCKWKADNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGA
VHDRLLNVWQIRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE
HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGNWFQPAIE
RVALNSKEPHMCLVRDISNSWVPKVETAITKVRTPMMNSEAKVLVPGLPGHHAAIKPLPQ
AEEVESKRKLGGNEVSIEERLGAMDIETKKEKDDLLQTNSFPVLLAQGLESNDFEMLNKV
LQTRNTNLIKRTVLRMPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLSTL
PDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKGMTSPGQKAKLVYEE
ESSEEESDDEIEDKDSDDNWDEDEEEKDSEKEEDIDEENEEEDEDTEENGEDRDVASEKE
LNGDSDLDPENESEEE
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggcggcgggcggcggcggtggccgcgaccccctggccccagcgggggtcccctgcgcc
ttctcccctcagagccaggcctattttgctttggcctctactgatggtcacctgcgagtg
tgggagacagctaacaaccggctgcatcaggagtacgtgccttccgcgcacctcagcggt
acctgcacctgcttggcctgggcgccagcgcggctgcaggccaaggaaagtcctcagagg
aaaaaaaggaaatcagaagctataggaactggtgaccagattgacttgttggcgcttggt
acagcagttggtagcattttattatacagtacagtaaaaggagaattacacagtaaatta
ataagtggtggacatgacaacagagtcaattgcatacagtggcatcaagacggtggctgt
ttatatagttgttcagatgataaacatattgtggaatggaacatacagacctgcaaagta
aagtgcaaatggaaagctgacaacagcagtgtcagttccctgtgcatcagcccagatgga
aagatgttactttcagcaggtcgaacaatcaaactgtgggttttggagaccaaagaagtc
tacagacacttcacagggcacgcgacgccagtttcatcacttatgttcactactatcaga
cctcctaacgagagccagccctttgatggaattacaggtctttatttcttatctggagca
gtgcatgaccggttacttaatgtctggcagatccggtcagaaaacaaagagaagaatgca
gtgatgtcttttacagttacagacgagcctgtctatatcgacttgactttgtcggaaaac
aaagaagagcctgtcaaattagctgtggtttgcagagatggtcaagtccatctttttgaa
cacatattaaatgggtactgcaaaaagcccttgacttcaaactgcacaattcagatagca
acacctgggaaaggcaagaaatcaacaccaaaaccaatccctattctagcagctgggttt
tgctcagacaaaatgtccttgttgcttgtatatggcaattggtttcagcctgctattgag
cgagtggctttaaactccaaagaacctcatatgtgtttagtaagggatatttcaaacagc
tgggtcccaaaagtagaaacggctataacaaaggtgagaacaccgatgatgaattctgaa
gcaaaagttctggtgccagggctacctggtcaccacgcagctatcaagcctcttccgcaa
gctgaggaagtagagagcaagaggaaattagggggaaatgaggttagcattgaagaacgc
ctgggagcaatggatatagagacaaagaaagaaaaggatgacctcctacagaccaatagc
tttccagttcttcttgcacaaggtttagaaagtaatgattttgaaatgctaaataaagta
ctgcaaactaggaatacaaacctaataaagaggactgtgttaaggatgcccctgcatgct
gttattccattgttgcaagagcttacaaagaggttgcaaggacaccctaatagtgctgtt
ttaatggttcagtggctgaaatgtgtgttaacggtccatgcatcatacctatccacattg
cctgacctggtgccccagcttgggacgctctaccagctgatggaaagcagagtcaaaact
tttcagaaactctcacatcttcacggaaagcttattcttctaatcacacaggttacggca
tcagagaaaacaaagggaatgacttcccctggacagaaggcaaagctagtatatgaagaa
gaatcttctgaagaggagtctgatgatgaaatagaagataaggattcagatgataattgg
gatgaagatgaggaagagaaagacagtgaaaaagaagaggatattgatgaagagaatgaa
gaggaagatgaagataccgaagaaaatggtgaggacagagatgtagcaagtgaaaaagag
ttaaatggagattctgatttagatcctgaaaatgaaagtgaagaagaatga

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