KEGG   Tupaia chinensis (Chinese tree shrew): 102495805
Entry
102495805         CDS       T02978                                 
Symbol
WDR48
Name
(RefSeq) WD repeat domain 48
  KO
K15361  WD repeat-containing protein 48
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    102495805 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tup03400]
    102495805 (WDR48)
DNA repair and recombination proteins [BR:tup03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     102495805 (WDR48)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_IP5PC_F WDR90_beta-prop_4th RAWUL WD40_like Beta-prop_VPS8 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 102495805
NCBI-ProteinID: XP_006161409
LinkDB
Position
Un
AA seq 568 aa
MSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKD
SIYSLAMNQLGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGS
SDGTIRLWSLGQQRCIATYRVHDEGVWALQVSDAFTHVYSGGRDRKIYCTDLRNPDIRVL
ICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHNFRASGDYDNDCTNPITPL
CTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKK
RFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQA
LLEYWPRTHVNPMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLL
CRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHASSGAKTLKKDRLSASD
MLQVRKVMEHVYEKIINLDNESQTTSSSNNEKPGEQEKEEDIAVLAEEKIELLCQDQVLD
PNMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgtcaacattgaggacacataaggattacgtaaaggccttagcatacgccaaggataaa
gaattggtagcatcggctgggttggacagacaaatattcctctgggatgtgaatactcta
acagccttgactgcctcaaataacactgtcacaacttcttctctaagtgggaacaaagat
tctatttacagcctggccatgaatcaactgggaacagtcattgtatcggggtccactgag
aaggttttaagggtatgggatccaagaacatgcgcaaaactgatgaagctgaaggggcac
acagataacgtgaaagcgttgctgctgaacagagacggcacccagtgtctttctggcagc
tctgatggcacgatccgcctctggtcccttggccagcagaggtgtatagccacgtaccga
gtccatgacgaaggcgtttgggccctgcaagtcagtgacgccttcacacacgtgtactcc
ggaggaagggaccggaagatttattgtactgacttaagaaaccctgacattcgagtgcta
atttgtgaagaaaaagcaccagttctcaaaatggagcttgataggtccgctgatccccct
cctgcaatctgggttgcaacaactaagtccacagtaaataaatggacattgaagggaatt
cataattttagagcctctggagattatgacaatgattgtacaaatcctataacacccctt
tgcacacaaccggaccaggtaattaaagggggagctagtattattcagtgccacattctt
aatgataagagacatatattaaccaaagataccaataataatgtggcatattgggatgtt
ttgaaggcatgtaaagttgaagatctgggcaaagtggatttcgaggatgaaattaagaaa
agatttaaaatggtgtatgtgccaaattggttctcagtggacttaaaaacggggatgttg
accatcactttggacgagagtgactgtttcgctgcttgggtttctgcaaaagatgccggt
ttcagcagccccgatgggtcagatccaaaattgaatttaggaggacttttactccaggca
ctgctggaatattggcctagaacacatgtgaatccaatggatgaagaagaaaatgaagta
aaccatgtgaatggggagcaggagaaccgggtgcagaaaggaaacgggtatttccaagtg
cccccacacacacccgtgatcttcggcgaagctggaggccgcacgctgttcaggctgctg
tgccgagattccgggggcgagacggaatccatgcttctcaacgagacagtgccacaatgg
gtaattgacatcactgtggataaaaatatgcccaaattcaacaaaattcctttctacctc
caacctcatgcatcttcgggagcaaaaaccttaaaaaaagacagactctctgctagtgac
atgctccaggtccggaaagtaatggagcatgtctacgagaaaattatcaacttggataat
gagtctcagaccaccagctcttctaataacgagaagccaggagaacaggaaaaagaagag
gacattgctgtgttggcagaggagaaaattgagcttctgtgccaggaccaggttttggat
cccaatatggacctccgaacagtgaagcacttcatatggaagagtggcggcgacctcacc
ctccattaccgccagaagtccacgtga

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