KEGG   Tupaia chinensis (Chinese tree shrew): 102497070
Entry
102497070         CDS       T02978                                 
Symbol
PRPF39
Name
(RefSeq) pre-mRNA processing factor 39
  KO
K13217  pre-mRNA-processing factor 39
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:tup00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tup03041]
    102497070 (PRPF39)
Spliceosome [BR:tup03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    102497070 (PRPF39)
SSDB
Motif
Pfam: HAT_PRP39_N HAT_PRP39_C Suf TPR_14 HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C TPR_MalT TPR_16
Other DBs
NCBI-GeneID: 102497070
NCBI-ProteinID: XP_006160662
LinkDB
Position
Un
AA seq 669 aa
MQNSHMDEYRNSSNGSTGNSSEIVVERPPDFSTEIMNVTEMEQSPDGSPNVNASTEESDM
ANAVDLPATATETEANFPAEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDK
FFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDAG
DPETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLY
SHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPA
KLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL
EFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKK
PMVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNLEEAEHLLQD
AIKNAKSNNESSFYAIKLARHLFKIQKNIPKSRKVLLEAMERDKENTKLHLNLLEMEYSG
DLKQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKE
QDSLKRKAENGSDEPEEKKAHTEDTSQSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNY
GQYYPPPPT
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgcaaaattctcacatggatgagtacaggaattctagtaatggcagcacaggcaacagt
tcagagatagtggtagaacgtcctcctgatttcagtactgagattatgaatgttacagaa
atggaacagtcacctgatggctctcctaatgtgaatgcatctacagaagaaagtgatatg
gcaaatgctgtggaccttccagcaacagcaacagaaacagaagcaaatttccctgcggaa
tatgaaaaattttggaaaaccgtagaaaataatccccaggattttacaggctgggtatat
ttacttcagtatgtagaacaggagaatcacttgatggctgccagaaaagcatttgacaaa
tttttcatacactatccatattgctatggttactggaaaaagtatgcagaccttgaaaag
cggcatgacaacattaaacaatcagatgaggtttatcggcgggggcttcaggcaatacct
cttagtgttgacctttggatacattacataaacttcttaaaagaaaccttggatgctggt
gatcctgagacaaacagtacaataagaggaacttttgagcatgctgttctagctgcagga
acagatttccgatcggacagactgtgggaaatgtacataaactgggaaaatgaacaggga
aacttgagagaagttacagctatatatgatcgtattcttggtattccaacacagctctat
agtcatcattttcagagatttaaagaacatgtacagaataacttgcctagagatctttta
actggtgaacagtttattcagctgcgaagagaattagcttccgtcaatggacatagtggt
gatgatggtcctcctggtgatgatctgccttcgggaattgaagatataactgatccagca
aagctaattactgaaatagaaaacatgagacacagaatcattgagattcatcaagagatg
tttaattataatgaacatgaagttagtaaaagatggacatttgaagaaggtattaaaaga
ccttattttcatgtgaagccattggaaaaggcacagctaaaaaactggaaagaatattta
gaatttgaaattgaaaatggaactcatgaacgtgttgtggttctgtttgaaagatgtgtc
atatcatgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccat
agcattgaaggagtgaggcatgtcttcagcagagcttgtactatacatcttccaaagaaa
cccatggtgcatatgctttgggcagcatttgaggaacagcagggtaatattaatgaagcc
aggaatatcttgagaacatttgaagaatgtgttctaggactggcaatggttcgtttgcga
agagtaagtttagaacggcggcatggcaatttggaagaagccgaacatttgcttcaggat
gccattaagaatgccaagtcaaataatgaatcatcattttatgctatcaaactagcccga
catctgttcaaaatacaaaaaaatattccaaagtcaagaaaggtgcttttggaagcaatg
gaaagagacaaagagaacacaaagttacacctcaatttacttgaaatggagtatagtggt
gacctcaaacaaaatgaagaaaatatcttaaattgttttgacaaagctatacatggttcg
ttacctattaaaatgagaattacattttctcagagaaaagtggaatttcttgaagatttt
ggttcagatgttaataaacttctgaatgcttatgatgaacatcaaacactcctaaaagaa
caggattctttaaaaaggaaagcagaaaatggatcagacgaaccagaggaaaagaaagca
catacagaagatacaagtcagtcatctacgcagatgatcgatggtgatttacaggcaaat
caagctgcatataactacagtgcctggtatcagtacaattatcagaatccttggaattat
ggacaatattatcctcctcctccaacctga

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