KEGG   Tupaia chinensis (Chinese tree shrew): 102497568
Entry
102497568         CDS       T02978                                 
Symbol
LTA
Name
(RefSeq) lymphotoxin alpha
  KO
K05468  lymphotoxin alpha (TNF superfamily, member 1)
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup04060  Cytokine-cytokine receptor interaction
tup04061  Viral protein interaction with cytokine and cytokine receptor
tup04064  NF-kappa B signaling pathway
tup04668  TNF signaling pathway
tup04940  Type I diabetes mellitus
tup05166  Human T-cell leukemia virus 1 infection
tup05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tup00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    102497568 (LTA)
   04668 TNF signaling pathway
    102497568 (LTA)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    102497568 (LTA)
   04061 Viral protein interaction with cytokine and cytokine receptor
    102497568 (LTA)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    102497568 (LTA)
   05168 Herpes simplex virus 1 infection
    102497568 (LTA)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    102497568 (LTA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:tup04052]
    102497568 (LTA)
Cytokines and neuropeptides [BR:tup04052]
 Cytokines
  Tumor necrosis fators
   102497568 (LTA)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 102497568
NCBI-ProteinID: XP_006154313
LinkDB
Position
Un
AA seq 205 aa
MTPSGRLCLGRVHSAPLLLLLQGLLLALPPGAQALPGVDLSPSAAQAAHQHPQKHLAPST
LKPAAHLVGDPSVQNTLRWRASTDRAFLRHGFALTNNSLLVPSSGLYFVYSQVVFSGEGC
SPQAAPTPLYLAHGVQLFSSQYPHHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTRGDQ
LSTHTVGTSHLLLSPSSVFFGAFAL
NT seq 618 nt   +upstreamnt  +downstreamnt
atgacaccatctggacgtctctgcctcgggagggtgcacagcgcccccctcctcctcctg
cttcaggggctgctgttggccctgccgcccggggcccaggcgctccctggggttgacctt
tcaccctcagcggcccaggctgcccaccagcacccccagaagcacttggcccccagcacc
ctcaagcctgctgctcacctcgttggagaccccagcgtgcagaacacgctgcgctggcga
gcgagcaccgaccgcgccttcctgcgccacggcttcgcgctgaccaacaactccctgctg
gtgcccagcagcggcctctacttcgtctactcgcaggtggtcttctccggggaaggctgc
tccccacaggccgcccccaccccgctctacctggcgcacggggtgcagctcttctcctcc
cagtacccgcaccacgtgccgctcctcagcgcccagaagtccgtctgcccagggccgcag
ggaccgtgggtgcgctcggtgtaccagggggccgtgttcctgctcactcggggagaccag
ctgtccactcacacagtcggcacctcccacctgctcctgagccccagcagcgtctttttt
ggagcttttgctctgtag

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