Tupaia chinensis (Chinese tree shrew): 102498138
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Entry
102498138 CDS
T02978
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tup03000
]
102498138 (NPAS1)
Transcription factors [BR:
tup03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102498138 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
HLH
PAS_4
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
102498138
NCBI-ProteinID:
XP_006142176
LinkDB
All DBs
Position
Un
AA seq
593 aa
AA seq
DB search
MTAPYPGSGGGGEVKCGGGRGASVPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGPPAGLA
PGRRGPTALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRARTHGPPTPPSVSSSSSSSSSSLADTPEAEASPTAAPPS
RVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAELPL
HGHMIVFRLSLGLTILACESRVSEHMDLGPSELVGRSCYQFVHAQDATSIRQSHLDLLDK
GQVMTGYYRWLQRAGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSQAEGGQTPLDAFQL
PASVACEDASSPRPEPTEPEPPVQGKKGKQAVPREKEEAPQTRSKRIKVEAGQRETTGSE
DSGEEEPSGHPAPRPEFTSVIRAGALKQDPVRPWGLTPPGDPPPSILHAGFLPPVVRGLC
TPSTIRYGPAELGLIYPHLQRLGPGPALPEAFYPTLGLPFAGPTGTRVPRKGD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccctaccccggcagtggcggcggaggcgaggtcaagtgcgggggaggccgt
ggcgccagcgtcccgtgggactttcttcccgggctgatggtcaaggctccgccgggaccc
tgcctgcaggcgcagcgcaaggagaagtcccgtaacgcggcgcgctcgcggcgtgggaag
gagaacctggagttcttcgagttggccaagctgctcccgctgcccggcgccatctcaagc
cagctggacaaggcgtccatcgtgcgccttagtgtcacctacctccgcctgcgacgtttc
gctgcgctcggggcgccgccctgggggttgagggctgcggggccgccggctggcctggcg
ccaggccgccggggccccaccgcactggtctccgaggtcttcgagcaacacctgggagga
cacatcttgcagtccctggacggcttcgtgttcgccttgaaccaggaggggaaattcctc
tacatctccgagaccgtctccatctacctggggctctcacaggtggagctgacgggcagc
agcgtcttcgactacatccatcctggggaccattccgaggtgctggagcaactggggctg
cgggcccgcacccacgggccccccaccccaccctccgtctcctcctcctcttcttcctct
tcctcctcgcttgcggatactcctgaagccgaggccagccccactgcggcgcccccctct
cgcgtccaggagcgctccttcttcatccgcatgaagtccaccctcaccaagagggggctg
cacgtcaaggcttcggggtacaaggtcatccacgtgaccgggcgcctgcgggcccgcgcc
ctgggccttgtggccctgggccacacgttgccccccgccccactggctgagctgcctctg
cacggacacatgatcgtcttccgtctcagcctgggtctcaccatccttgcctgtgagagc
agagtcagtgagcacatggacctgggcccctcagagctggtgggtcgcagctgctaccag
tttgtccatgcacaggacgccaccagcatccgccaaagccacctggacctgctggacaag
ggccaggtgatgactggttactaccgctggctgcagcgcgcaggtggctttgtgtggctg
cagtccgtggccaccgtggctgggagtgggaagagccccggggaacaccatgtgctctgg
gtcagccacgtgctcagccaagccgagggtggccagacacctctggacgccttccagctt
ccagccagcgtggcctgtgaggacgcgtccagcccccggccagagcccacagagccagag
cctccagtgcaagggaagaaagggaagcaggcggtcccccgggaaaaggaggaggcaccc
cagacacgcagcaaacgcattaaagtggaggctggccagagggaaactacaggctccgag
gacagcggggaggaggagccgtcaggccatccagcaccccggcctgagttcacctctgtc
atccgggccggggctctgaaacaggaccctgtgcggccatggggcctgacacctcccggg
gaccccccaccttccatcctccacgcaggcttcctgccgcccgtggtgcggggcctgtgc
acacccagcaccatccgatacggcccggctgagctgggcctcatttacccgcacctgcag
aggctgggcccggggcccgccctccccgaggccttctaccccaccctgggcctgccattc
gcggggcccacgggcaccagggtgccgcggaagggagactga
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