Tupaia chinensis (Chinese tree shrew): 102499185
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Entry
102499185 CDS
T02978
Symbol
SEC13
Name
(RefSeq) SEC13 homolog, nuclear pore and COPII coat complex component
KO
K14004
protein transport protein SEC13
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013
Nucleocytoplasmic transport
tup04141
Protein processing in endoplasmic reticulum
tup04150
mTOR signaling pathway
tup05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102499185 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102499185 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
102499185 (SEC13)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102499185 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102499185 (SEC13)
04131 Membrane trafficking [BR:
tup04131
]
102499185 (SEC13)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102499185 (SEC13)
Membrane trafficking [BR:
tup04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
102499185 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102499185 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
102499185 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_RIG_2nd
EIF3I
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_EML
NBCH_WD40
Pico_P2A
Motif
Other DBs
NCBI-GeneID:
102499185
NCBI-ProteinID:
XP_006152053
LinkDB
All DBs
Position
Un
AA seq
322 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHAGHDSSVNSVCWAPHDCGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEDEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQVGSV
FIWTCDDASGNTWSPRLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKEAVDGQWVCI
SDVHKGQGSVSTSVTEGQQNEQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcagtaattaacacggtggacacctcccatgaggacatgattcatgatgcccag
atggactactatggcacccgcctggcaacctgctcatcagacaggtccgtcaaaatcttc
gatgtgcgcaacggagggcagatcctcatcgctgacctcaggggacacgagggtcccgtg
tggcaggtggcctgggcccaccccatgtatggcaatatcctggcatcgtgctcctacgac
cggaaagtcatcatctggaaggaggagaatggcacctgggagaagacgcacgagcatgcg
ggacatgactcctcagtcaactccgtgtgctgggccccccatgactgcggcctgatcctg
gcctgtgggagctcagacggggccatctccctgctgacctacaccggggaaggccagtgg
gaagtgaagaagatcaacaacgcgcacactattggctgcaacgccgtcagctgggcccca
gctgttgtacctggaagcctcatagaccagccgtcagggcagaaacccaattacatcaag
aagtttgcgtcaggtggctgtgacaatctcatcaagctgtggaaggaggatgaggacggc
cagtggaaggaggagcagaagctggaagcgcacagtgactgggttcgcgacgtggcctgg
gccccctccattggcctgcccaccagcaccattgccagctgctcccaggttgggtctgtg
ttcatttggacctgtgatgatgcctcaggcaatacgtggtctcccaggctgctgcacaag
ttcaatgatgtcgtgtggcacgtcagctggtccattacagccaacatcctggccgtttca
ggtggagacaataaggtgaccctgtggaaggaggcagtcgacggacagtgggtgtgcatc
agtgatgtccacaagggccagggttctgtgtccacctcagtcacagaaggtcagcagaac
gagcagtga
DBGET
integrated database retrieval system
