Tupaia chinensis (Chinese tree shrew): 102499353
Help
Entry
102499353 CDS
T02978
Symbol
AAAS
Name
(RefSeq) aladin WD repeat nucleoporin
KO
K14320
aladin
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102499353 (AAAS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102499353 (AAAS)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102499353 (AAAS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
PD40
Beta-prop_EIPR1
DSE1_N
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
DUF5789
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
102499353
NCBI-ProteinID:
XP_006169184
LinkDB
All DBs
Position
Un
AA seq
543 aa
AA seq
DB search
MCSLALFPPPPPRGQVTLYEHNNELVTGNSYESPPPDFRGQWINLPVLHLTKDPLKTPGR
LDHGTRTAFIHHREQVWKRCINIWRDVGLFGVLNEIANSEEEVFEWVKTASGWALALCRW
ASSLHGSLFPHLSLRSEDLIAEFAQVTNWSSCCLRVFAWHPHTNKFAVALLDDSVRVYNA
TSTIVPSLKHRLQRNVAALAWKPLSASVLAVACQSCILIWTLDPTSLSTRPSSGCAQVLS
HPGHTPVTSLAWAPSGSRLLSASPVDAAILVWDVSTETCVPLPWFRGGGVTNLVWSPDGS
KVLATTPSAVFRVWEAQMWTCERWPTLSGRCQTGCWSPDGNRLLFTVLGEPLIYSLSFPE
RCGEGKGRVGGAKSATIVADLSETTIQTPDGEERLGGEAHSMVWDPSGERLAVLMKGNPR
VQDGKPVILLFRTRNSPVFELLPCGVIQGEPGAQAQLITFHPSFNKGALLSVCWSTGRIA
HIPLYFVNAQFPRFSPVLGRAQEPPAGGGGSIHDLPLFTETSPTSAPWDTLPGPLPARPH
SPL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccctggccttgttccctccgccgccgcctaggggtcaagtcaccttatatgag
cacaataacgagctggtgacgggcaacagctacgagagcccgcctcccgacttccggggc
cagtggatcaatcttccggttctacatctgaccaaggatccactgaagacccctgggagg
ctggaccatggcacaagaactgcctttatccatcaccgggaacaagtgtggaagagatgc
atcaatatttggcgtgatgtgggcctttttggggtactgaatgaaattgcaaactcagag
gaagaggtgtttgagtgggtgaagacagcgagcggctgggccctagcactctgtcgatgg
gcctcctccctccatgggtccctgttcccccatctgtctctgaggagcgaagatctgatt
gctgaatttgcccaagtcacaaactggtccagctgctgtctgcgggtctttgcatggcat
ccccacaccaacaagtttgcggtggccctgctggatgactcggtccgtgtgtacaatgcc
accagcactatagtcccctccctgaagcaccggctgcagcgaaatgtggcagctctggcc
tggaagcccctcagtgcttcggtcttggctgtggcctgccagagctgtattctcatctgg
accctggaccccacctccttatcgacacgaccctcttctggctgtgcgcaagtgctgtct
caccctgggcatacacctgtcaccagcttggcctgggcccccagtgggagccggctgctc
tcggcttcacctgtggatgctgctatcctggtgtgggatgtctcaacagagacctgtgtt
cctcttccctggtttcgaggaggtggggttaccaacctggtctggtctccagatggcagc
aaagtcctggctaccaccccttcagctgtctttcgagtctgggaggcccagatgtggact
tgtgagagatggcctactctgtccgggcgctgtcagactggctgctggagcccagatgga
aaccgactgctgttcactgtattaggggaaccgctgatttactctctgtcattcccagag
cgttgtggtgagggaaaggggcgtgttggaggtgcaaaatcagcaacgattgtggcagat
ttgtccgagacaacaatacagaccccagatggtgaggagaggcttgggggagaggcccac
tccatggtttgggaccccagtggggagcgtctggctgtgctcatgaaaggaaacccacgg
gtacaggatggtaaaccagtcatcctcctttttcggactcgaaatagccctgtgtttgag
ctgcttccatgtggtgttatccagggggagccaggagcccaggcccagctcatcactttc
cacccttccttcaacaaaggagccctgctcagtgtgtgctggtctacaggccgaattgcc
cacatccctctgtactttgtcaatgcccagtttccacgttttagcccagtgcttggtcgg
gctcaagaacccccagctgggggtggaggctctattcatgacctgcccctctttactgag
acatccccaacttctgccccttgggacactctcccagggccactacctgctcggccccac
tcccctctctaa
DBGET
integrated database retrieval system