KEGG   Tupaia chinensis (Chinese tree shrew): 102499353
Entry
102499353         CDS       T02978                                 
Symbol
AAAS
Name
(RefSeq) aladin WD repeat nucleoporin
  KO
K14320  aladin
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102499353 (AAAS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102499353 (AAAS)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102499353 (AAAS)
SSDB
Motif
Pfam: Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 PD40 Beta-prop_EIPR1 DSE1_N WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta DUF5789 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 102499353
NCBI-ProteinID: XP_006169184
LinkDB
Position
Un
AA seq 543 aa
MCSLALFPPPPPRGQVTLYEHNNELVTGNSYESPPPDFRGQWINLPVLHLTKDPLKTPGR
LDHGTRTAFIHHREQVWKRCINIWRDVGLFGVLNEIANSEEEVFEWVKTASGWALALCRW
ASSLHGSLFPHLSLRSEDLIAEFAQVTNWSSCCLRVFAWHPHTNKFAVALLDDSVRVYNA
TSTIVPSLKHRLQRNVAALAWKPLSASVLAVACQSCILIWTLDPTSLSTRPSSGCAQVLS
HPGHTPVTSLAWAPSGSRLLSASPVDAAILVWDVSTETCVPLPWFRGGGVTNLVWSPDGS
KVLATTPSAVFRVWEAQMWTCERWPTLSGRCQTGCWSPDGNRLLFTVLGEPLIYSLSFPE
RCGEGKGRVGGAKSATIVADLSETTIQTPDGEERLGGEAHSMVWDPSGERLAVLMKGNPR
VQDGKPVILLFRTRNSPVFELLPCGVIQGEPGAQAQLITFHPSFNKGALLSVCWSTGRIA
HIPLYFVNAQFPRFSPVLGRAQEPPAGGGGSIHDLPLFTETSPTSAPWDTLPGPLPARPH
SPL
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgtgctccctggccttgttccctccgccgccgcctaggggtcaagtcaccttatatgag
cacaataacgagctggtgacgggcaacagctacgagagcccgcctcccgacttccggggc
cagtggatcaatcttccggttctacatctgaccaaggatccactgaagacccctgggagg
ctggaccatggcacaagaactgcctttatccatcaccgggaacaagtgtggaagagatgc
atcaatatttggcgtgatgtgggcctttttggggtactgaatgaaattgcaaactcagag
gaagaggtgtttgagtgggtgaagacagcgagcggctgggccctagcactctgtcgatgg
gcctcctccctccatgggtccctgttcccccatctgtctctgaggagcgaagatctgatt
gctgaatttgcccaagtcacaaactggtccagctgctgtctgcgggtctttgcatggcat
ccccacaccaacaagtttgcggtggccctgctggatgactcggtccgtgtgtacaatgcc
accagcactatagtcccctccctgaagcaccggctgcagcgaaatgtggcagctctggcc
tggaagcccctcagtgcttcggtcttggctgtggcctgccagagctgtattctcatctgg
accctggaccccacctccttatcgacacgaccctcttctggctgtgcgcaagtgctgtct
caccctgggcatacacctgtcaccagcttggcctgggcccccagtgggagccggctgctc
tcggcttcacctgtggatgctgctatcctggtgtgggatgtctcaacagagacctgtgtt
cctcttccctggtttcgaggaggtggggttaccaacctggtctggtctccagatggcagc
aaagtcctggctaccaccccttcagctgtctttcgagtctgggaggcccagatgtggact
tgtgagagatggcctactctgtccgggcgctgtcagactggctgctggagcccagatgga
aaccgactgctgttcactgtattaggggaaccgctgatttactctctgtcattcccagag
cgttgtggtgagggaaaggggcgtgttggaggtgcaaaatcagcaacgattgtggcagat
ttgtccgagacaacaatacagaccccagatggtgaggagaggcttgggggagaggcccac
tccatggtttgggaccccagtggggagcgtctggctgtgctcatgaaaggaaacccacgg
gtacaggatggtaaaccagtcatcctcctttttcggactcgaaatagccctgtgtttgag
ctgcttccatgtggtgttatccagggggagccaggagcccaggcccagctcatcactttc
cacccttccttcaacaaaggagccctgctcagtgtgtgctggtctacaggccgaattgcc
cacatccctctgtactttgtcaatgcccagtttccacgttttagcccagtgcttggtcgg
gctcaagaacccccagctgggggtggaggctctattcatgacctgcccctctttactgag
acatccccaacttctgccccttgggacactctcccagggccactacctgctcggccccac
tcccctctctaa

DBGET integrated database retrieval system