KEGG   Tupaia chinensis (Chinese tree shrew): 102499705
Entry
102499705         CDS       T02978                                 
Symbol
THOC6
Name
(RefSeq) THO complex 6
  KO
K13175  THO complex subunit 6
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102499705 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102499705 (THOC6)
   03041 Spliceosome [BR:tup03041]
    102499705 (THOC6)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102499705 (THOC6)
Spliceosome [BR:tup03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102499705 (THOC6)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_EML_2 NBCH_WD40 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR54 EIF3I Beta-prop_IFT122_1st Beta-prop_IP5PC_F Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_NOL10_N TIG
Other DBs
NCBI-GeneID: 102499705
NCBI-ProteinID: XP_006163053
LinkDB
Position
Un
AA seq 341 aa
MERAVPFSVPLGQTEVFQALQRLHMTVFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYCMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEVNALLLVPKENSLILAGGDCQLHTMDLETGAFTRALRGHTDYIHCLALRERG
PEVLSGGEDGTVRLWDLRAAKEVQTIEVYKHEECARPQNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPMRAPQKHVTFYQDLILSAGQGPCVNQWQLSGELRAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagcgagctgtgccgttctcggtgcctctgggtcagacagaggtgtttcaggccctg
cagcggctgcacatgactgtcttctcccagagcgtctctccctgcggcaagttcctggca
gctggcaacaattatgggcagatcgccatcttcagcttatctgctgctttgagctcagag
gccaaagaggaaagtaagaagcccgtggtgaccttccaagcccacgatgggcccgtctac
tgcatggtctccaccgaccgccacctgctcagtgctggggatggggaggtgaaggcctgg
ctttgggcagagatcctcaagaagggctgtaaggagctgtggcgtcgccagcccccttac
aggaccagcctggaagtgccagaggtcaacgctttgctgctcgtccccaaggagaattcc
ctcatcctggctgggggagactgtcagctgcacaccatggacctcgagaccggggccttc
acgcgtgccctccggggccacacagactacatccattgcctagcactgcgggaacggggc
cctgaggtgctgtcgggtggcgaggacgggactgtgcggctttgggacctccgcgcggcc
aaggaggtccagacgatcgaggtctataagcatgaggagtgcgcgaggccccagaacgga
cgctggatcggatgcctggcaactgactccgactggatggtctgtggagggggcccagcc
cttactctctggcacctccgatcctccacccccaccaccgtcttccctatgcgggcccca
cagaagcatgtcaccttctatcaggacctgattctgtccgctggccagggcccctgtgtc
aaccagtggcagctgagcggggagctcagggcccaggtgcctggctcctccccggggctg
ctcagcctcagcctcaaccagcagcctgctgcacccgagtgcaaggtcctgacagccgca
ggcaacagctgccgggtggatgtcttcaccaacctgggctaccgggccttctccctgtcc
ttctga

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