Tupaia chinensis (Chinese tree shrew): 102499813
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Entry
102499813 CDS
T02978
Symbol
SS18L1
Name
(RefSeq) SS18L1, nBAF chromatin remodeling complex subunit
KO
K15623
protein SSXT
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03082
ATP-dependent chromatin remodeling
tup05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102499813 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102499813 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tup03036
]
102499813 (SS18L1)
Chromosome and associated proteins [BR:
tup03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102499813 (SS18L1)
GBAF(ncBAF) complex
102499813 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
102499813
NCBI-ProteinID:
XP_006157778
LinkDB
All DBs
Position
Un
AA seq
420 aa
AA seq
DB search
MVMSAKTTSKLGHACRCQGSGLGLILLGNSGGRVAEGLQRRGRVQECAGIVGELMLDENH
QLIQCILDYQSKGKAAECTQYQQLLHRNLVYLATIADSNQNMQSLLPAPPTQSMSLGPSA
LAQSSTGQGLHSQGSLSDTISTGLPPASLMQGQIGNGPNHVAMQQTAQSTLPTTSMSMSG
SSHGSGPGYSHAGPASQGVPMQGQGAIGSYVSRANINMQSTPVPMMHQQAASSHYSSAQG
GSQHYQGQSSIAMMGQRPMAPYRPSQQGSSQQYLGQEEYYGEQYGHSQGAAEPGSQQYYP
DGHGDYAYQQSSYTEQSYDRSFEESTQHYYEGGSSQYSQQTGYQQSTAQQQYPGQQYPGQ
QYPGQQQGYGPAQGAPSQYPGYQQGQGQQFGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggttatgtccgcgaagaccacttctaaattaggtcatgcttgcaggtgccagggctca
ggacttgggctcatacttctggggaacagtggtggccgtgtggcagagggactccagagg
agaggcagggtccaggaatgtgcaggaatcgtgggtgagctgatgctggacgagaaccac
cagctgatccagtgcatcctggactaccagagcaaggggaaggcagcagagtgcacccag
taccagcagctcctgcaccggaacctggtgtacctggccacgatcgcagactccaaccag
aacatgcagtcgctgctgcccgccccgccaacacagagcatgagcctgggccccagcgcg
ctggctcagagcagcaccggccagggcctgcactcccagggcagcctcagcgacaccatc
agcacaggcctacccccagcctccctcatgcagggccagatcggcaacggtccgaaccac
gtggccatgcagcagacggcgcagagtacgctgcccacgacctccatgagcatgtcgggc
agcagccacggctctggacctggctacagccatgcgggccctgcctcgcagggtgtcccc
atgcaggggcagggtgccattggcagctacgtgtcccgggccaacatcaacatgcagtcc
accccagtccccatgatgcaccagcaggcggcttcgtcccactatagctcggcccagggc
gggagccagcactaccagggccagtcgtccatcgccatgatgggccagcggcccatggcg
ccctaccggccctcccagcaaggctcctcgcagcagtacctgggccaagaggaatactac
ggcgagcagtacggccatagccagggcgccgcggagcccgggagccagcagtactaccct
gacggccacggcgactacgcctatcagcagtcgtcctacacggagcagagctacgacagg
tccttcgaggagtccacgcagcactactacgaaggcggcagctcccagtacagccagcag
accgggtaccagcagagcacagcacagcagcagtaccccggccagcagtaccccggccag
cagtaccccggccagcagcaaggctacgggcccgcccagggagcgccctcacagtacccc
ggctaccagcaggggcaaggccagcaattcggcagctacagggcctcgcagacgggaccc
tccgcccagcagcagcggccttacggctacgagcagggccagtatggaaattaccagcaa
taa
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