Tupaia chinensis (Chinese tree shrew): 102499836
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Entry
102499836 CDS
T02978
Symbol
MBD4
Name
(RefSeq) methyl-CpG binding domain 4, DNA glycosylase
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102499836 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tup03036
]
102499836 (MBD4)
03400 DNA repair and recombination proteins [BR:
tup03400
]
102499836 (MBD4)
Chromosome and associated proteins [BR:
tup03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
102499836 (MBD4)
DNA repair and recombination proteins [BR:
tup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102499836 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
102499836
NCBI-ProteinID:
XP_006160717
LinkDB
All DBs
Position
Un
AA seq
575 aa
AA seq
DB search
MGMAGMESPKLEDGGAAPLVTASERLVPNHQGDLRKEDIAVGLERMEEEEKQTVISSSSE
CNPLLQESIGSAQSGDVAMTECRKSAPCGWESFFLKQRLSGKTAGRFDVYIISPQGLKFR
SKSSLARYLCKHGETSLTLEDFDFTVPSRRGIRSTRKDCSLAAPASQLQSESHSAGRSPR
TRSRWKKDVSPLPSSRSELQDSREPSGFSSTHLPLRKDEGINDTKRGKVRKSERKATSLK
APQNKKHKGGCRKSRSDAIRSDRRRSGYSDTAADRGPAVQDNQLEQTPCLSDARTSDETL
HVTPEEKSLIKENSLGSESHFHFEPITSGLMRWTQEAELSEKHEDTFLDAKEVRRKVDAG
ERKEHLHTDIFKGGSELENNCPETKKERAFEKVSQEDAIPRTQVEKRKRSLYFSSKYNKG
ALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKY
PSAEVARAADWREVSEILKPLGLYDLRAKTIIRFSDEYLTKQWRYPIELHGIGKYGNDSY
RIFCVNEWKQVHPEDHKLNKYHDWLWENYEKLSLS
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggccgggatggagagtccgaaactagaggacggcggagctgccccactggtc
accgccagtgagcgccttgtcccaaaccaccagggtgacctccgcaaggaagatattgct
gttgggttggaaagaatggaagaggaggagaagcaaacagtgataagcagcagcagtgag
tgtaaccccttgctgcaagaatccattggctctgctcagtctggtgatgttgcaatgaca
gaatgccgtaagtctgccccgtgtggatgggaaagtttttttttgaagcaacggttatct
ggaaaaacagcgggaagattcgatgtgtacattatcagcccccaaggactgaagttcaga
tccaaaagttcacttgctcgttatctttgcaaacatggagagacctctcttacactcgaa
gactttgattttaccgtaccttctagaaggggcatcagatcaacacgcaaagactgcagc
ttggcagccccggcatcccaactgcagagcgaaagtcacagtgcaggacggagtcccagg
acacgaagcaggtggaaaaaggatgtgtctcctctgccgagcagtcgctcagagttgcag
gatagcagagaaccttctggcttcagttccacgcatttgcctttgagaaaagatgagggt
attaatgatactaagcgtgggaaggttagaaagtccgaaaggaaagcgacttccttgaaa
gcacctcaaaataaaaaacacaaaggagggtgcaggaagagccgctcggacgccattcgg
agtgacagaagacgatctgggtacagtgacacagcggccgaccgtggccctgctgtacaa
gacaaccagcttgagcaaacgccctgcctttccgatgccagaacaagtgacgagaccctc
cacgtgacccctgaagaaaagagccttataaaggaaaactcgttgggctcagaatcacat
tttcatttcgaaccaataacttctggcctcatgcgatggacccaagaagcagaactcagc
gagaagcatgaggatacctttttagatgcaaaggaagtcagaagaaaagtcgatgctggg
gaaaggaaggaacatttgcatactgacattttcaaagggggttctgaattggagaacaac
tgcccagaaaccaagaaagagcgagcttttgaaaaagtatctcaagaagacgccatccca
cgaacccaagtagaaaagaggaagaggagcctgtatttttccagcaaatacaacaaagga
gcacttagccccccgcgacgcaaagcctttaagaagtggacgcctcctcggtcacctttc
aatctcgtccaggaaacactttttcacgatccatggaagctcctcatcgcaactatattt
ctcaatcggacctcaggcaaaatggccatccctgtgctttgggagttcctggagaagtac
ccttcagctgaggtggcgagagctgcagactggagggaagtgtcagagattcttaaacct
ctcggtctctacgatcttcgagcaaaaaccatcatccggttttcagatgagtatctgaca
aagcagtggaggtatcccattgagctgcacgggatcggcaaatacggcaacgactcttac
cgcattttctgcgtcaacgagtggaagcaggtgcaccctgaagaccacaagttaaataaa
taccatgactggctttgggaaaactatgaaaaattaagtctgtcttaa
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