KEGG   Tupaia chinensis (Chinese tree shrew): 102500188
Entry
102500188         CDS       T02978                                 
Symbol
WDR82
Name
(RefSeq) WD repeat domain 82
  KO
K14962  COMPASS component SWD2
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102500188 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102500188 (WDR82)
   03036 Chromosome and associated proteins [BR:tup03036]
    102500188 (WDR82)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     102500188 (WDR82)
Chromosome and associated proteins [BR:tup03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     102500188 (WDR82)
    COMPASS/SET1 complex (yeast)
     102500188 (WDR82)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_Aladin WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_RFWD3 NBCH_WD40 WD_LRWD1 PAC11 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_ACSF4 MinC_C Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 102500188
NCBI-ProteinID: XP_006169389
LinkDB
Position
Un
AA seq 313 aa
MKLTDGVLRSCRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA
VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgaccgacggcgtgctgcggagctgccgagtcgccaaggtgttccgcgagaac
tcggacaagatcaactgcttcgacttcagccccaacggcgagacggtcatctcgagcagc
gatgacgactccatcgtgctgtacgactgccaggagggcaaaccaaagagaaccttgtac
agtaagaaatatggcgtggacctcatcagatatacgcatgcagcaaacacagttgtttac
agctcaaacaaaatagatgatactattcgttacttgtccttgcatgacaacaaatacatc
agatactttcctggacacagcaaaagggtggtggccttgtccatgtcacccgtggatgac
actttcatttctgggtctcttgataagaccattcgactctgggatctccgatctcctaac
tgccagggcctcatgcatctacagggcaaaccagtttgttcttttgatcccgaaggatta
atttttgctgctggtgtcaactcggaaatggtcaaactttatgaccttcgttcttttgat
aagggtccctttgcaacctttaagatgcagtatgatcggacttgtgaatggacaggactt
aagttcagcaatgatggcaagctcatcctcatctccaccaatggcagctttatccgtctc
atcgatgcattcaaaggagtggtgatgcatacgtttgggggttatgccaacagtaaagct
gtcactttggaggcttcatttactccagattctcagtttattatgattggttcagaggat
ggcaagatccatgtctggaatggagagagtggtataaaagtcgccgtgttggatggtaaa
cacacaggccccattacctgtttgcagttcaaccccaagttcatgacctttgccagcgcc
tgttccaacatggccttctggttgcccactattgatgactga

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