KEGG   Tupaia chinensis (Chinese tree shrew): 102500713
Entry
102500713         CDS       T02978                                 
Symbol
PVRL1
Name
(RefSeq) nectin-1
  KO
K06081  poliovirus receptor-related protein 1
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03266  Virion - Herpesvirus
tup04514  Cell adhesion molecule (CAM) interaction
tup04517  IgSF CAM signaling
tup04520  Adherens junction
tup05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    102500713 (PVRL1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    102500713 (PVRL1)
   04517 IgSF CAM signaling
    102500713 (PVRL1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    102500713 (PVRL1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102500713 (PVRL1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:tup04515]
    102500713 (PVRL1)
   04090 CD molecules [BR:tup04090]
    102500713 (PVRL1)
Cell adhesion molecules [BR:tup04515]
 Immunoglobulin superfamily
  Nectin family
   102500713 (PVRL1)
CD molecules [BR:tup04090]
 Proteins
  102500713 (PVRL1)
SSDB
Motif
Pfam: C2-set_2 V-set Ig_3 Ig_2 ig I-set Ig_PVRIG TM_ErbB1
Other DBs
NCBI-GeneID: 102500713
NCBI-ProteinID: XP_006152381
LinkDB
Position
Un
AA seq 516 aa
MARMELAGAAGRWWGLALGLTAFFLPGAHTQVVQVNDSMYGFIGTDVVLHCSFANPLPSV
KITQVTWQKATNGSKQNVAIYNPAMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEG
VYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPP
SVVSWETRLKGEAEYQEIRNPNGTMTVISRYRLVPSREAHRQSLACIVNYHMDRFKESLT
LNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTL
FFRGPINYSLAGTYVCEATNPIGTRSGQVEVNITEFPHTPSPPEHGRRAGPVPTAIIGGV
AGSVLLLLIVVGGIVVALRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPD
DSDDEKKTGPLGGSSYEEEEEEEGGGGGERKVGGPHPKYDEDAKRPYFTVDEAEARQDGY
GDRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggctcggatggagcttgcgggcgccgctggacgctggtggggactcgctctcggcttg
accgcattcttcctcccaggtgcccacacgcaggtggtccaggtgaacgactccatgtat
ggcttcatcggcacagacgtggtgctgcactgcagctttgccaacccactgcccagcgtg
aagatcacccaggtcacgtggcagaaggccaccaacggctccaagcagaacgtggccatc
tacaaccctgccatgggcgtctcagtgctggcgccctaccgcgagcgggtagagttcctg
cggccctccttcaccgatggcaccatccgcctgtcccgcctggagttggaggacgaaggg
gtctacatctgcgagtttgccaccttccctacgggcaaccgtgagagccagctcaacctc
actgtgatggccaaacccaccaactggatagagggcacccaggcagtgcttcgagccaag
aaggggcaggacgacaaggtcctggtggccacctgcacctcagccaacgggaagcccccc
agtgtggtatcctgggaaacacggctgaagggcgaggcagagtaccaggagatccggaac
cccaacggcacgatgacggtcatcagccggtaccgcctggtgcccagccgggaagcccac
cggcagtccctggcctgcatcgtcaactaccacatggaccgcttcaaggagagcctcacc
ctcaacgtgcagtatgagcccgaggtgaccatcgaggggttcgacggtaactggtacctg
cagcggatggacgtgaagctcacgtgcaaggccgatgccaaccccccggccaccgagtac
cactggaccacgctgaatggctctctccccaagggcgtggaggcccagaacagaaccctc
ttcttcaggggacccatcaactacagcctggctgggacctatgtctgtgaggccacaaac
cccatcggcacccgctcgggccaggtggaggtcaacatcacagaattcccccacaccccg
tctcctcctgaacatgggcggcgcgccgggccggtgcccacggccatcattgggggtgtg
gcagggagcgtgctgctgctgctgattgtggtcggcgggatcgtggtggccctgcgccgg
cgccggcataccttcaagggcgattacagcaccaagaagcacgtgtacggcaacggctac
agcaaggcgggcatcccccagcaccacccgcccatggcgcagaacctgcagtacccggat
gactcggacgacgagaagaagaccggcccgctgggcgggagcagctatgaggaggaagag
gaggaggaagggggaggagggggtgagcgcaaagtgggcggcccccaccccaagtacgac
gaggacgccaagcggccctacttcacagtggatgaggccgaggcccgtcaggacggctac
ggggaccggactctgggctaccagtacgaccccgagcagctggacttagctgagaacatg
gtttctcagaacgacgggtctttcatttccaagaaggagtggtatgtgtag

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