Tupaia chinensis (Chinese tree shrew): 102501414
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Entry
102501414 CDS
T02978
Symbol
RC3H1, Roquin
Name
(RefSeq) ring finger and CCCH-type domains 1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tup03000
]
102501414 (RC3H1)
04121 Ubiquitin system [BR:
tup04121
]
102501414 (RC3H1)
Transcription factors [BR:
tup03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102501414 (RC3H1)
Ubiquitin system [BR:
tup04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102501414 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
102501414
NCBI-ProteinID:
XP_006153398
LinkDB
All DBs
Position
Un
AA seq
1133 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILPDE
GAVDLPSRKPSALPNGIVSTGNTVTQLIPRGTDPGYDSSLKSGKMDHMSSSAPGSPPDLL
ESVPKSISALPVNPHPVPPRGPADLPPMPVTKPLQMVPRGSQLYPAQQADVYYPDPRGAA
PAFEPTPYQQGMYYTTPQQCVSRFVRPPPSAPEPGPPYLDHYSPYLQDRVVSSQYGAQPQ
QYPPMYPPHYDGRRVYPAQPYAREEIFRESPIPIEIPPAAVPSYVPESRERYQQMEGYYP
VAPHPTQIRPSYLREPPYNRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDPQRRTAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA
PQGAPTKSINISDYSPYGTHSGWGGSPYSPHQNIPSQGHFSERERISMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANTLPGQTQPSAPPPKWPGMIS
SEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNASKQAENGQPEPQSKVPAEDLTL
TFSSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaacgattcgaaagcccatcagtttgggctgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccattcgaccagaccactatcaatacagac
attgagctcctccccgtgaactcagcattgctgcagctagtgggtgctcaggtccctgag
cagcagcccattactttgtgtagtggggttgaagatacaaagcattatgaggaagctaag
aaatgtgtagaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaatagcactactcagagtgtcctgagccgcccaatgcagaggaagcttgtgactctg
gtccactgccaactagtggaagaagaaggcaggattcgtgccatgagggcagctcgatct
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcagcaactctct
tctaatctttgggcagcagttagggccaggggctgccagttccttggtccagcaatgcag
gaagaagctctaaagctggttctgctagccttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaagattggagccacgatttcctcaagcttctaaaact
agcatcggacatgtagttcagctcctttatagagcctcctgcttcaaggtcaccaaacgt
gatgaagactcttccttgatgcaactgaaagaagaatttagaacctatgaagctctgcgg
cgagaacatgactcccagatagtgcagattgctatggaagcaggcttacgaattgcacca
gaccagtggtcatctttgctttatggagaccagtcccacaaatctcatatgcagtccatt
attgacaagttgcagaccccagcctcctttgcacagagtgttcaggaactaacaattgct
ctccagcggactggagacccagcaaatttgaaccgactaagaccccatctggagctgtta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatgga
ctggttgctgtacgtacagtagtacatgggctggttgattatatccagaatcacagcaaa
aaaggagcagatcagcagcagcctccacagcatagcaaatataaaacatacatgtgtcga
gacatgaagcagagaggcggatgtccacgtggggccagctgtacatttgcacactcccag
gaggaactggaaaaatttcgtaaaatgaacaaacgcctggttcccagaagacccctgagt
gcctctttgggtcagcttaatgaggtgggcctgccatcagcagctattcttccagatgaa
ggtgcagtggatctgcccagcagaaaaccctcggctctgccaaacggaattgtatcaaca
gggaacacagtaacacagctgattccacgagggacggaccccggctatgattctagtctg
aaatcaggaaagatggatcatatgagcagtagtgctcctggatcccctcctgatctgctg
gaatccgtccctaagagtatttctgccttacctgtgaatccacatcctgtaccaccaagg
gggccagcagatctgcctcccatgcctgtcaccaaaccgcttcagatggtaccacgaggt
tctcagttatatccagcacaacaggcagatgtttattatccagatccccggggagctgct
ccagcatttgaaccaacaccttatcagcagggtatgtactatacaactccacaacaatgt
gtctctcgctttgtccgacctccaccatctgctcctgaacctggtcctccctatttggat
cattattcaccctacctccaagaccgtgtagtaagctctcagtatggtgcacagccacaa
cagtacccacctatgtacccacctcactatgatggccgccgagtctaccctgctcagcct
tatgcgagagaggagatatttcgagaaagccccatacctattgagattccacctgcagca
gtaccatcctatgtacctgaatccagagaaagataccagcaaatggagggttattaccca
gtggctcctcatccaactcaaatcagaccgtcatacctcagagagcctccttataaccgg
cttcctcctcctccccagccccatcctagtctagatgagctacatcgccgacgaaaggaa
ataatggcccaactagaggaaagaaaggttatctctccacctccttttgcaccttcacca
accttgcctcctacctttcatcaagaggaatttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattatagccaatactctccctggtcatgtgataccatcggctcc
tacattggaaccaaagatgcaaaacccaaagatgttgtggcagcagggagtgtggaaatg
atgaatgtggagagtaaaggaatgagagaccagaggttagatcctcaaagaagaacagca
gaaacgagtgatgatgaccttatcccatttggagaccggccaacagtatctcgatttggt
gccatttctcgaacttccaaaacaatatatcaaggtgcaggtccaatgcaggccatggca
ccacagggagctcccacaaaatctattaacatttcagattatagtccatatggaacccat
agtggctggggaggttctccgtattcacctcatcaaaacataccttctcagggacacttt
agtgagagggagagaatatccatgtctgaggttgccagtcacggaaagcctcttccatct
gctgagcgggaacagctgcgactggaattgcagcagctgaaccatcagattagccagcag
acccagctacgtggattggaggccgttagtaacaggctggtgttgcagagggaggcgaac
accctgccaggccagacacagccctcagccccacctcccaagtggcctggaatgatctca
agtgaacagttaagtttggaactacaccaggtggaaagggaaatcggaaagagaacccgg
gaactgagtatggagaaccagtgttctctggacatgaaaagcaaattgaatgcaagtaag
caagcagaaaatggacaaccagaaccacaaagcaaggttccagccgaggatcttacattg
acattcagcagtgatgtaccgaatggatcagccttgacacaagagaatatcagcctcctg
tcaaacaagaccagctccctgaacctgtcagaggatcctgagggaggaggggataacaat
gactcccagagatcaggagttactcccagttctgctccctaa
DBGET
integrated database retrieval system
