Tupaia chinensis (Chinese tree shrew): 102502907
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Entry
102502907 CDS
T02978
Symbol
FAM188B
Name
(RefSeq) family with sequence similarity 188 member B
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tup04121
]
102502907 (FAM188B)
Enzymes [BR:
tup01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102502907 (FAM188B)
Ubiquitin system [BR:
tup04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
102502907 (FAM188B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
102502907
NCBI-ProteinID:
XP_006146300
LinkDB
All DBs
Position
Un
AA seq
777 aa
AA seq
DB search
MDSLFVEEVAASLVREFLSRKGLKRTGVTMDQERPRSDLSINSRNDLRKVLHLEFLYKEN
KAKENPLKTSLELMTRYFLDHFGNAANNFTQETPIPALSVPKKNNKLPLKCSETTLVNIY
DLSDEDAGWRTSLSETSRARQENLDGDVLGNFVSSKRPPHKSKPVQVVSGESPHLASVWE
KMEKRHSPEPSLEVKRVGEKTRPKSGLIVRGMMAGPTASSPQDSLRKRALRRPPTLSSAT
QPQEEGRKMPELLAHTPACPALQEGLASSTSSASRSPPGQLSELTADKRKTLPRSPPHLL
SKGLPRRERGSSRELSEGSPAADSSTDADRTLSNLYLPGGNSRVTQERLERAFKRQGSQP
PPRKHPLPESDNGDHELGALRLEDVEDELIREEVTLGPGPSVRKLQVTSQPIDLSVAKEI
KTLLFGSSLCCFNEEWKLQSFSFNDTASLKYGIVQNKGGPCGVLAAVQGCVLQKLLFEGD
SQADYAGRLQPSDVHRTRCLALAIADIVWRAGGRKKAVVALTSGTQQFSPTGKYKADGVL
ETLLLHTVTCYDELVAFLQQSVQQFEAGPYGCILLTLSAILSRSTELVRQDFDVPTNHLI
GAHGYCTQELVNLLLTGKAVSNVFNDVVELDSGNGNITLLRGIAARSDIGFLSLFEHYDV
CQVGCFLKTPRFPIWVVCSESHFSVLFSLRPELLCDWRTERLFDLYYYDGLANQQEQIRL
TIDTTQTIPENKEDDLIPPLELCIRTKIAKMMNQEGRLTISNGMVGAIKPCSVAADG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggacagcctgtttgtggaggaggtggccgcctccctggtcagggagttcctcagcaga
aagggcctgaagaggacaggtgtgaccatggaccaggagcgcccacgctccgacctcagc
atcaacagcagaaacgaccttcgcaaggttttgcatcttgagtttctctacaaggagaac
aaagcaaaggaaaatcctctaaaaacaagccttgaactgatgaccagatattttctggat
cactttggaaatgctgctaacaatttcactcaagagacaccaatccctgcactctcggtt
ccaaagaaaaataacaaattgccattgaaatgctcggagactacgctggtgaatatatat
gacctttcagatgaagatgcaggatggagaacatcgttgtcagaaacaagcagagccaga
caagaaaatcttgatggggatgtgcttggtaattttgtatcatccaaaaggccaccacac
aaaagtaagcccgtgcaggtggtctcgggtgaaagcccccacttggcttccgtgtgggag
aagatggagaagcgtcactcgccagagccttccttggaagtgaagagggtgggagagaag
accaggccaaagtctggcctgatcgtgcgaggcatgatggccgggcccactgccagttcc
ccacaggattccctccgcaagcgtgctctgaggcggcccccgaccctgagcagtgccacc
cagccccaagaagaaggccggaagatgcctgagctcttggcccacactccagcctgtcca
gccctgcaggagggcctggcttccagcaccagctctgcctccaggagccctccaggtcag
ctcagcgaactgaccgcagacaagcggaaaacattgcccaggagcccaccgcacctgctc
agcaaaggtctgccccggcgggagaggggcagctccagagagctttcagagggcagccca
gcagcggacagcagcacagacgcagacaggacgctctccaacctctacttgcctggtggg
aattccagggtgacccaggaacggctggaaagagcgttcaagcggcagggcagccagccc
cctcccaggaaacacccactcccagagtctgacaacggggaccatgagctgggtgccctg
cggctagaggatgtggaggatgaactgataagggaagaagtcaccttgggcccgggcccg
tcggtgcgcaagctgcaggtcacatcgcagcccatcgacctctctgtcgccaaggaaata
aagacccttctgtttggttccagcttgtgctgtttcaatgaagaatggaaacttcagagt
ttttcctttaatgacacggcctcactaaaatatggcatcgtgcagaacaaggggggtccc
tgtggggttctggcagctgtccaaggctgcgtcctacaaaaactcctgtttgaaggagat
agccaagctgactatgctgggcgactgcagccttcagacgtgcacaggacccgctgcctc
gccctggccatagcggacatcgtgtggcgggctgggggccgaaagaaagccgtggtcgca
ctgacttcgggaacacagcagttcagtccaacggggaaatacaaagcagatggagtctta
gaaacactcctccttcacactgtgacctgctacgacgagctggtggccttccttcaacaa
agtgtccagcagttcgaagcaggcccctacggatgcatcctgctgaccctgtcggccatc
ctgtcccggtccacggagcttgtccgccaggacttcgatgtgcccaccaaccacctgatt
ggagcacacggttactgcacacaggaacttgtcaatctgctcctgaccgggaaggccgtg
tccaatgttttcaatgacgtggtggagctggattccgggaacgggaacatcacgcttctc
agaggcatcgctgcccgcagcgacatcggcttcttatctctctttgagcactatgatgtc
tgccaggtcggctgcttcctgaagaccccgaggttccccatctgggtggtgtgcagcgag
agccacttcagcgtgctcttcagcctgcggcccgagctgctgtgtgactggaggactgag
aggctcttcgacctatactactacgacggcctggccaaccagcaggagcagatccggctg
accatcgacaccacccagaccatacctgagaacaaagaggacgaccttatcccgcccctg
gagctctgcatcagaaccaaaattgcaaagatgatgaaccaagagggaagactgactatc
tccaatggcatggtaggagcaattaaaccctgcagtgttgctgcagatggctga
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