KEGG   Tupaia chinensis (Chinese tree shrew): 102503176
Entry
102503176         CDS       T02978                                 
Symbol
HBS1L
Name
(RefSeq) HBS1 like translational GTPase
  KO
K14416  elongation factor 1 alpha-like protein
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03015  mRNA surveillance pathway
tup05134  Legionellosis
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102503176 (HBS1L)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05134 Legionellosis
    102503176 (HBS1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102503176 (HBS1L)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102503176 (HBS1L)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 AAA_22 DO-GTPase2 GIP1_N
Other DBs
NCBI-GeneID: 102503176
NCBI-ProteinID: XP_006144401
LinkDB
Position
Un
AA seq 683 aa
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVVEPVEENDYE
DLKASSNALLNHQLRGTDQARLYSCLDHMREILGDAVSDEVLIEAVLKNRFDVEKALSVV
LEQNSIQNLKDKSEGTVSAGKMAKGKSVGSQSSRSESEIVPKVARMTVSGKKQTMGFEVP
RVTAEENGHSFHTPQKGPPSEDTSVGSSDALEKSALATHTIQVPEEQSSALTPVKKSGKL
RQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKK
AGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKIITLMDAPGHKDFIPNMITGAAQ
ADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEI
TGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPPQ
RSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPV
DWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEIPVTKGFPVL
LHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPIALELYKDFKE
LGRFMLRYSGSTIAAGVVTEIKE
NT seq 2052 nt   +upstreamnt  +downstreamnt
atggcccggcatcggaatgtccgaggctacaactacgatgaagactttgaagatgatgat
ctttatggccagtctgtagaagatgattattgtatttcgccatcaacagctgctcagttt
atttactcacgacgtgacaaaccttcagttgttgagcctgtagaagaaaatgattatgaa
gatctgaaagcatcttccaatgcacttttgaaccatcagctaagaggaactgatcaagct
cgtctttattcatgccttgatcacatgagagagatacttggagatgctgtatcagatgaa
gtattgattgaagcagttctgaagaacaggtttgatgtggagaaggctttgtcagtggtt
ctggaacaaaatagcatccagaatttgaaagacaagagtgaaggaacagtgtctgcagga
aaaatggccaaaggaaaatcagtaggttcccagtcatcacgaagtgaatctgaaattgtg
ccaaaggttgctagaatgactgtgtctggaaagaagcaaactatgggatttgaagtgcct
agagtaacagctgaagaaaatggtcatagtttccacacacctcaaaaaggacctcctagt
gaagatacaagcgttggttcttctgatgctcttgagaaatcagctcttgcaacccacacc
attcaagtaccagaagagcagagttcagcactaacaccagtgaaaaagtctggcaagctg
aggcagcaaatagatgtgaaagcagaactggagaagcgacaaggagggaagcagctcctc
aacttagtggtcattggtcatgttgatgctgggaaaagtactctgatgggccatttgctt
tatcttctgggaaatgtaaacaaaaggacgatgcataagtatgaacaagaatctaaaaaa
gctggcaaagcttcatttgcatatgcatgggtcttggatgagacaggggaagaacgggaa
aggggagtaacaatggatgttggtatgacaaagtttgaaactacaaccaaaattattaca
ttaatggatgctccaggccataaggatttcattccaaatatgattacaggggcagcccag
gcagatgtagctgttttagttgtagatgccagcaggggagagtttgaagctggatttgag
accgggggacagacacgagaacatggcctcctggtccgttctcttggagtgacacagctt
gcagttgcagtcaacaaaatggatcaggttaattggcaacaagaaaggtttcaagagatt
actggaaaacttggacactttcttaagcaagcaggttttaaggagagtgacgtagctttt
atccctacaagtggtctcagtggtgaaaatctaatcacaagatctcagtcaagcgaactc
accaaatggtataaagggctatgtttattagaacaaattgactctttcaagccaccccaa
cgatctattgataagccgtttagattatgcgtgtctgatgttttcaaagatcaaggatct
ggattttgtgtaactggtaaaattgaagctggttatatccagaccggtgaccgactacta
gcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcatgacgaacctgtt
gattgggcagcagcaggtgatcatgttagtcttactttggttgggatggatatcatcaaa
atcaatgtaggctgcatattttgtggccccaaagaacccattaaagcttgcactcgtttc
agagcccgaatcctcatctttaatattgaaattcctgtcactaaaggatttcctgtgctg
ttacactaccagactgtcagtgaacctgctgtgattaaacgattgataagtgtcttaaat
aaaagcacaggtgaagtcacaaagaaaaagcccaagttgttaactaaaggtcagaatgca
ttggtagagctacagacacaaagacccatagctcttgagctatacaaagactttaaagag
ctggggagattcatgctgcggtacagtggttctacaatagctgctggcgttgttactgag
ataaaagaatga

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