Tupaia chinensis (Chinese tree shrew): 102503176
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Entry
102503176 CDS
T02978
Symbol
HBS1L
Name
(RefSeq) HBS1 like translational GTPase
KO
K14416
elongation factor 1 alpha-like protein
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03015
mRNA surveillance pathway
tup05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102503176 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
102503176 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102503176 (HBS1L)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102503176 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GIP1_N
Motif
Other DBs
NCBI-GeneID:
102503176
NCBI-ProteinID:
XP_006144401
LinkDB
All DBs
Position
Un
AA seq
683 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVVEPVEENDYE
DLKASSNALLNHQLRGTDQARLYSCLDHMREILGDAVSDEVLIEAVLKNRFDVEKALSVV
LEQNSIQNLKDKSEGTVSAGKMAKGKSVGSQSSRSESEIVPKVARMTVSGKKQTMGFEVP
RVTAEENGHSFHTPQKGPPSEDTSVGSSDALEKSALATHTIQVPEEQSSALTPVKKSGKL
RQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKK
AGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKIITLMDAPGHKDFIPNMITGAAQ
ADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEI
TGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPPQ
RSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPV
DWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEIPVTKGFPVL
LHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPIALELYKDFKE
LGRFMLRYSGSTIAAGVVTEIKE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctacaactacgatgaagactttgaagatgatgat
ctttatggccagtctgtagaagatgattattgtatttcgccatcaacagctgctcagttt
atttactcacgacgtgacaaaccttcagttgttgagcctgtagaagaaaatgattatgaa
gatctgaaagcatcttccaatgcacttttgaaccatcagctaagaggaactgatcaagct
cgtctttattcatgccttgatcacatgagagagatacttggagatgctgtatcagatgaa
gtattgattgaagcagttctgaagaacaggtttgatgtggagaaggctttgtcagtggtt
ctggaacaaaatagcatccagaatttgaaagacaagagtgaaggaacagtgtctgcagga
aaaatggccaaaggaaaatcagtaggttcccagtcatcacgaagtgaatctgaaattgtg
ccaaaggttgctagaatgactgtgtctggaaagaagcaaactatgggatttgaagtgcct
agagtaacagctgaagaaaatggtcatagtttccacacacctcaaaaaggacctcctagt
gaagatacaagcgttggttcttctgatgctcttgagaaatcagctcttgcaacccacacc
attcaagtaccagaagagcagagttcagcactaacaccagtgaaaaagtctggcaagctg
aggcagcaaatagatgtgaaagcagaactggagaagcgacaaggagggaagcagctcctc
aacttagtggtcattggtcatgttgatgctgggaaaagtactctgatgggccatttgctt
tatcttctgggaaatgtaaacaaaaggacgatgcataagtatgaacaagaatctaaaaaa
gctggcaaagcttcatttgcatatgcatgggtcttggatgagacaggggaagaacgggaa
aggggagtaacaatggatgttggtatgacaaagtttgaaactacaaccaaaattattaca
ttaatggatgctccaggccataaggatttcattccaaatatgattacaggggcagcccag
gcagatgtagctgttttagttgtagatgccagcaggggagagtttgaagctggatttgag
accgggggacagacacgagaacatggcctcctggtccgttctcttggagtgacacagctt
gcagttgcagtcaacaaaatggatcaggttaattggcaacaagaaaggtttcaagagatt
actggaaaacttggacactttcttaagcaagcaggttttaaggagagtgacgtagctttt
atccctacaagtggtctcagtggtgaaaatctaatcacaagatctcagtcaagcgaactc
accaaatggtataaagggctatgtttattagaacaaattgactctttcaagccaccccaa
cgatctattgataagccgtttagattatgcgtgtctgatgttttcaaagatcaaggatct
ggattttgtgtaactggtaaaattgaagctggttatatccagaccggtgaccgactacta
gcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcatgacgaacctgtt
gattgggcagcagcaggtgatcatgttagtcttactttggttgggatggatatcatcaaa
atcaatgtaggctgcatattttgtggccccaaagaacccattaaagcttgcactcgtttc
agagcccgaatcctcatctttaatattgaaattcctgtcactaaaggatttcctgtgctg
ttacactaccagactgtcagtgaacctgctgtgattaaacgattgataagtgtcttaaat
aaaagcacaggtgaagtcacaaagaaaaagcccaagttgttaactaaaggtcagaatgca
ttggtagagctacagacacaaagacccatagctcttgagctatacaaagactttaaagag
ctggggagattcatgctgcggtacagtggttctacaatagctgctggcgttgttactgag
ataaaagaatga
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