Tupaia belangeri chinensis (Chinese tree shrew): 102503353
Help
Entry
102503353 CDS
T02978
Symbol
PATL1
Name
(RefSeq) PAT1 homolog 1, processing body mRNA decay factor
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
tup
Tupaia belangeri chinensis (Chinese tree shrew)
Pathway
tup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102503353 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102503353 (PATL1)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102503353 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
102503353 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
102503353
NCBI-ProteinID:
XP_006147462
LinkDB
All DBs
Position
Un
AA seq
769 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PATVNEETGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPAVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPNVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPIAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPQQHPPGPGTHVQNLRSQAPVFRPDTTHLHPQ
HRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSQDHLRKDPYANLMLQREKDWVSKIQMMQL
QSTDPYLDDFYYQNYFEKLEKLSAAEEMQGDGPKKERTKLITPQVAKLEHAYKPVQFEGS
LGKLTVSSVNNPRKMIDAVVTSRGEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYER
RYLLSLEEERPALMDERKHKIVSMYENLRGKLPGQERPSDDHFVQIMCIRKGKRMVARIL
PFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLMN
LPQSATAPAPSNPHLTAVLQNKFGLSLLLLLLSRGEDLQSSDPAPESTQNNQWTEVMFMA
TRELLRIPQAALAKPVSIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggcctcggagaagaggatgaggaaattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaattggaggagaagcta
ccagcgacagttaatgaagagacaggcaatggagagagagatgagatggacttgttgggt
gaccatgaggagaatctggcagaaaggcttagtaagatggtaatagaaaatgaactagaa
gatccagctatcatgagggcagtgcagaccaggccagttttacaaccccaaccaggaagt
ctgaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactactt
gctcaggaaatgcctgctgtgtctgtattagaatatgccttgcctcagaggcctccacag
ggcccggaagatgatcgggacctttctgagcgcgcgttaccaagacggtcaacttcacct
atcatcgggagtcctcctgttagagctgtacccataggcaccccacctaagcagatggct
gttcccagcttcaaccagcagattctgtgtccgaaacctgtccacgttcgacccccaatg
ccacctcgctatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctcctgggtcatcctttccctcctaatgttcctcctgtcctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgtgggtagtccaattgctgccatgaatcccaagttg
ctgcaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gccccaccacccgctacaccacctcctcagcagcaccctcccggcccaggaactcatgtg
caaaacctaagatctcaggccccagtgtttagaccggacacaactcaccttcatccacag
caccgtcgactcttgcatcaaagacaacaacagaatagaaatcagcatcggaatctcaat
ggtgcaggagacagaggaagccaccggagcagtcaagaccatctccggaaggatccatat
gccaatctcatgttgcagcgggagaaggattgggtttctaaaattcagatgatgcagcta
caaagcactgatccctacctggatgatttttattaccagaattactttgaaaaactggag
aaactgtcagctgctgaagaaatgcaaggggatggacctaaaaaggagcgcaccaagctc
atcacccctcaggtggccaagttggagcatgcctataagccagtgcaatttgagggatct
ttgggaaaacttaccgtatctagtgtgaataatccccgaaaaatgatcgatgctgttgtg
acatctcggggtgaggatgatgagacaaaagaaaaacaggttcgggataagagaagaaaa
acccttgtcataattgagaaaacttatagtttactccttgacgtggaggattacgaaagg
cgttatctcctaagtctagaagaagagcgacctgccttgatggatgaaagaaagcacaaa
attgttagcatgtatgagaacttacgagggaaactgcctggacaggagaggccaagtgat
gaccactttgtacagatcatgtgtattcgcaaagggaagagaatggttgcccgtatcctt
cctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaatctccct
ttccttatcaagaaggatgcacaagatgaggtgctgccatgcttattgagtcccttctct
ctcctcctgtatcatcttccatcagtgactgtcaccagccttctgcaacagctaatgaac
ctacctcaaagtgcaactgcaccagcaccctccaatcctcacctcactgctgtgctacag
aacaagttcggcctgtcactgctcctcctcctcctgagccgcggagaagacttacagagc
tcagaccctgctccagaatcaacacaaaataaccagtggacagaggtgatgttcatggca
acccgagaacttctacggattccgcaagcagccctggccaagccagtctctatacccacc
aacctagtgtccctcttttcccgctatgtcgaccggcagaaactgaacttgctggagaca
aaactgcagctagttcaggggatacgataa
DBGET
integrated database retrieval system
