Turicibacter sp. H121: AT726_00315
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Entry
AT726_00315 CDS
T04254
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tur
Turicibacter sp. H121
Pathway
tur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT726_00315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tur03019
]
AT726_00315
03016 Transfer RNA biogenesis [BR:
tur03016
]
AT726_00315
Enzymes [BR:
tur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AT726_00315
Messenger RNA biogenesis [BR:
tur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AT726_00315
Transfer RNA biogenesis [BR:
tur03016
]
Prokaryotic type
tRNA degradation factors
AT726_00315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
SPATA25
GCN5L1
PAS_GdpP
Motif
Other DBs
NCBI-ProteinID:
AMC07586
LinkDB
All DBs
Position
complement(77329..79437)
Genome browser
AA seq
702 aa
AA seq
DB search
MSDKHVYSFELAGRPLTFEIGELAKQANASVLVRYGDTVVLSTCVASKEPKDIDFFPLTI
GYEERLYAVGKVPGGFIKREGRPSEHAILAGRLIDRPIRPLFPDGFRNDVQVINYVMSVD
HNNSPEVSAMIGSSLSLSISDIPFEGPIAGVIVGRVNGEFVLNPTVEQLENSDIDLTVAG
TKDAVNMVEAGAKEVPEEVMLEAIMFGHDAIKQIIAFQEQIVAEIGKEKMELNLYEIDAD
INARVREMAEADMLAAIQVVEKHARQEAIDAVNKRVLEVFEAEEVTEKELKQVKEVLNKI
VKEEVRRLITDEKVRPDGRKIDEIRPLSSRVDLLPRTHGSALFTRGQTQALSICTLGALN
EHQMLDGLEVEETKRFMHHYNFPPFSVGETGRYGAPGRREVGHGALGERALKQVMPSEKE
FPYTVRLVSEVLESNGSTSQASICASTMALMAAGVPIKAPVAGIAMGLVKKGENYTVLTD
IQGMEDHLGDMDFKVAGTAQGVTALQMDIKIEGLSREILEEALQQAKVGRMQILNHMLGT
IAETREDLSAYAPKIKVMTIKVDKIRDVIGPGGKQINEIIDKTGVKIDIEQDGTVYILHD
NTENINQAVAMIEDIVREVEVGKIYLGKVVRIEKFGAFVEIFPGQDGLVHISQLAEERVA
KTEDVVNVGDQIYVKVTEIDDRGRVNLSRKEAMKEQAEQQAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaacacgtttattcgtttgagttagctggccgtccattaacttttgagatt
ggtgagttagcaaagcaagcgaatgcttcggttttagtacgttatggtgatacagttgtt
ttatcaacatgtgttgcttcaaaagaacctaaagatatagattttttcccattaacaatt
ggatatgaagaacgtctttatgccgtaggtaaagtacctggtggatttattaaacgtgag
gggcgtccaagtgaacatgcgattttagcaggtcgtttaattgaccgtcctattcgtcca
ttattccctgatggattccgtaatgatgtacaagtcatcaactatgtcatgagtgtggat
cataataactcaccagaagtatcagcgatgattggatcatcattatctttatctatttca
gatattccgtttgaaggaccaattgctggggtcattgtaggtcgtgtcaatggagaattc
gtgctaaacccaacggttgagcaattagaaaattcagatatcgatttaacagtagctgga
acaaaagatgcagtcaacatggttgaagctggagcaaaagaagttccagaagaagtgatg
ttagaagctatcatgttcggtcatgatgctatcaaacaaattattgccttccaagagcaa
attgttgctgaaattggaaaggaaaaaatggaattaaacttatatgaaatcgatgcagac
attaatgcgcgtgtacgtgaaatggcagaagcagatatgttagccgctattcaagtagtt
gaaaaacatgcacgtcaagaagcgattgatgcggtaaataaacgtgtgttagaagtgttt
gaggcagaagaggtcactgaaaaagaattaaaacaagttaaagaagttttaaataaaatc
gttaaagaagaagtacgccgtttaatcacagatgaaaaagtacgtccggatggtcgtaaa
attgatgagattcgtccattatcatctcgtgtcgatttattacctcgtacacatggatca
gcgttattcacacgtggacaaacacaagccttatcaatttgtacattaggcgctttaaat
gagcaccaaatgttagatggacttgaagttgaagaaacaaaacgcttcatgcaccactat
aacttccctccattctcagttggagaaacgggacgttatggagcaccaggtcgtcgtgaa
gttggtcatggggctttaggagagcgtgcgttaaaacaagtaatgccatctgaaaaagaa
ttcccatatacagtgcgtttagtatctgaggttttagaatcaaatggttcaacgtctcaa
gcttcaatttgtgcatctacgatggcattaatggcggctggagttccaattaaagcacca
gttgcagggattgctatggggcttgttaaaaaaggtgaaaattatacggttttaactgat
atccaagggatggaagatcatttaggagatatggacttcaaagtagcggggacagctcaa
ggggttactgctttacaaatggatatcaaaattgaagggttaagccgtgagattttagaa
gaggcccttcaacaagctaaagttggacgtatgcaaatcttaaatcatatgttaggaaca
attgctgaaactcgtgaggatttatcagcttacgctccaaaaattaaagtgatgacaatt
aaagtggataaaatccgtgatgtgattggacctggtggaaaacaaatcaatgaaatcatt
gataaaacaggggttaaaattgatattgaacaagatggaacagtttatatcttacatgac
aacacagaaaatattaatcaagcggttgcgatgattgaggatatcgttcgtgaggtcgaa
gttggtaagatttatttaggtaaagttgttcgtattgaaaaattcggtgcctttgttgaa
atcttccctggacaagatggattagtgcatatttctcaattagcagaagaacgtgtagct
aaaacagaagatgttgtgaatgttggagatcaaatttacgttaaagtaacggaaattgat
gatcgtggacgtgtgaatttatcacgcaaagaagcgatgaaagaacaagcggagcaacaa
gcagaataa
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