Turicibacter sp. H121: AT726_00940
Help
Entry
AT726_00940 CDS
T04254
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tur
Turicibacter sp. H121
Brite
KEGG Orthology (KO) [BR:
tur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tur03032
]
AT726_00940
03400 DNA repair and recombination proteins [BR:
tur03400
]
AT726_00940
Enzymes [BR:
tur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AT726_00940
DNA replication proteins [BR:
tur03032
]
Prokaryotic type
DNA Topoisomerases
AT726_00940
DNA repair and recombination proteins [BR:
tur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AT726_00940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DNA_ligase_ZBD
Zn_ribbon_RPB9
COA8
Motif
Other DBs
NCBI-ProteinID:
AMC07698
UniProt:
A0A0X8G291
LinkDB
All DBs
Position
complement(213833..215896)
Genome browser
AA seq
687 aa
AA seq
DB search
MGKNLVIVESPAKAKTIENYLGSDYVVLSSVGHIRDLATTGPGGLGVDVEDHFKPNYKNV
TGKSKVIKELKQAAKNSDAVYLATDPDREGEAISWHLADVLGLDVDLERRVVFNEITKDA
ILEAFKHPRAIDMDLVRSQESRRILDRIIGFKLSKLLQSKIKSKSAGRVQSVALKLIVER
EKEIQKFVSEEYWSVHAMFERESAKIEAELVKKANKKISIANEDEVKAILAELSDPYVVE
KVEKKKKSKQPKLPFITSTLQQEAASKLGYNAKKTMTIAQKLYEGVNIGSETVGLITYMR
TDSTRLADNFVDATKSFIKQNYGANYVKTGSTNAKKVKNAQEAHEAIRPSSVARTPEEMK
PYLKRDELRLYKLIWERAVASLMKSATVEATTIEVRSNDYLFRVNGQVLVFDGYLRVYSY
EETKNAALPRLSEGDTLALVDVEPQQHFTQPPARYSEAKLIKEMEELGIGRPSTYAQTME
TLKNRGYVTLEDKKFKPTDQGILTSEKLAEFFSEFINVEYTAEMENNLDEISKGQKVWYD
ELKVFYDHFMPMLEDAQKNMEKIAPVEIGEECPECGSPLVIRRGRYGEFVACSGYPTCKY
IKKETKEEAAPVSTGVKCPKCEKGEIVEKKTRRGKVFYGCNQYPSCDYALWHKPVDKKCP
KCDSLLVVKGKKNEIQCPNKECDYKEE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaatttagtaattgtagagtcgcctgctaaagctaaaacgattgaaaactac
ttaggatcagattatgtggttctatcaagcgttggtcatattcgagatttagcaacgaca
ggtccaggaggtttaggtgtggatgttgaagaccactttaaacccaactataaaaacgta
acaggaaaatcaaaggtcattaaagaattaaaacaagcagctaaaaattcagatgctgtt
tacctcgcaactgaccccgaccgcgagggagaggcgattagttggcatttagcagatgtt
ttaggacttgatgttgatttagagcgtcgagtagtatttaatgagattacaaaagatgcg
attttagaagcattcaaacatccacgtgcgattgatatggatttggttcgctctcaagaa
agtcgtcgtattttagaccgcattattggatttaaattaagtaagttattacaaagtaaa
atcaaaagtaaaagtgcgggacgagttcaatcagtagcattgaagttaattgttgaacgt
gagaaagaaattcaaaaattcgttagtgaagaatactggtcagttcatgctatgtttgag
cgggaaagtgcaaaaattgaagcagaattagtaaagaaagctaataagaagatttcaatt
gcgaatgaagatgaagtcaaagccatcttagctgaattaagtgatccttatgtagtggaa
aaggttgaaaagaaaaaaaaatcaaaacaaccgaagttaccatttatcacttcaactctt
caacaagaagctgcaagtaaattaggttataatgcgaagaagacaatgacaattgctcaa
aaattatacgagggggttaatatcggttccgaaactgttggattaattacatatatgcgt
accgactcgactcgtttagccgataacttcgttgatgcaactaagtcatttattaaacaa
aattatggtgcaaattatgttaaaacaggaagtacaaatgcgaagaaagttaaaaatgca
caagaagcgcatgaggctattcgcccatcatcagtcgcgcgtacaccagaagagatgaaa
ccttatttaaaacgtgatgaactgcgtttatataaactcatttgggaacgtgctgttgcg
agcttaatgaaaagtgcaacagttgaagcgacaacgattgaagttcgctcaaatgattac
ttattccgcgttaacggtcaagtgctagtgtttgatggatatttacgtgtctatagctat
gaagaaacaaaaaatgcagctttaccacgtttaagtgaaggggatacgttagcgttagtt
gatgttgaaccacaacaacattttactcaaccacctgctcgttatagcgaagcgaaatta
attaaggaaatggaagagttagggattggacgtccatcgacttatgcacaaacaatggag
acgttaaaaaatcgaggttacgtgacacttgaggataaaaagtttaagccaacggatcaa
ggaattttaacaagtgagaaattagctgaattcttctctgagtttattaatgtggagtat
actgcagagatggaaaataatttagatgaaatttcaaagggacaaaaagtttggtacgat
gaattaaaagtcttttacgatcattttatgccaatgcttgaagatgctcaaaaaaatatg
gagaaaattgctccagttgaaattggggaggaatgtccagaatgtggtagtccacttgtc
attcgtcgtgggcgttacggtgagtttgtcgcatgtagtggctatccgacatgtaagtat
attaaaaaggaaacaaaagaagaggctgcacccgtttcgacaggagttaaatgtccgaaa
tgtgaaaaaggtgaaatcgttgaaaagaaaacacgccgtggaaaagtcttctatggatgt
aatcaatatccaagctgtgattatgcactttggcataaaccagttgataagaaatgtcca
aaatgcgatagcttgttagtcgttaaagggaagaaaaatgaaattcaatgtccgaataag
gaatgtgactataaagaagaataa
DBGET
integrated database retrieval system
