Turicibacter sp. H121: AT726_02665
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Entry
AT726_02665 CDS
T04254
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tur
Turicibacter sp. H121
Pathway
tur03030
DNA replication
tur03410
Base excision repair
tur03420
Nucleotide excision repair
tur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT726_02665
03410 Base excision repair
AT726_02665
03420 Nucleotide excision repair
AT726_02665
03440 Homologous recombination
AT726_02665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tur03032
]
AT726_02665
03400 DNA repair and recombination proteins [BR:
tur03400
]
AT726_02665
Enzymes [BR:
tur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT726_02665
DNA replication proteins [BR:
tur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AT726_02665
DNA repair and recombination proteins [BR:
tur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AT726_02665
NER (nucleotide excision repair)
GGR (global genome repair) factors
AT726_02665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
DUF4559
HHH
Motif
Other DBs
NCBI-ProteinID:
AMC07962
UniProt:
A0A109RMK3
LinkDB
All DBs
Position
complement(537119..539755)
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AA seq
878 aa
AA seq
DB search
MNTLVLIDGNSLMYRAYYATAYSGNLMKTSTGIFTNALYGFVNMMNKVMDEYNHTHMLVA
FDAGKTTFRHEFLDSYKDGRKPMPDELRSQINLIKKYLDLLGVKRLELPTYEADDIIGTL
ATLGEQTDFEKIHIITGDKDLLQMADEKTTVHITRKGVTDIESFTPEAVFAKYELSPSQI
VDLKGLMGDPSDNLPGIPGVGEKTAIKLLKQFGTVENLVTHTDELKGKMKEKVEANVEQA
LLCKRMATIHREVPLPVTFDDLFYQGPETAELMNFFKEMEFNAFLKKMKLEEVKEEKPKA
PIRIILEAGELETLSYQNSAIHVEIFEENYHQANILGIAIVNETDAYYVPFEVAKESQAF
MSFLADEGVKKSVFDVKRSRVALMWQGFDLRGVDFDLLLATYVINPTNVSNEFKKVALHY
DYDDVLYDEEVYGKGAKRAVAPIEKVAQHSIDIATAVFKLKETALEQLKEQEQLSLFEEM
EMPLAEVLAVMEYNGMSLDLTTLDEMGQDLKGRIEALESQIFDHVGAPFNINSPKQLGEV
LFEKLGLPVVKKTKTGYSTNADVLEKLSDAHPIIKLIMEYRTLTKLYSTYIEGLKKACYE
DGKVHTIFNQALTQTGRLSSIEPNLQNIPIRLEEGRMIRRAFVPSQEGWVILGADYSQIE
LRILAHISNTESLIDAFKHGGDIHKKTAMDVFKVSEEEMTSDLRRSAKAINFGIIYGMSA
FGLSENLNITQKEAKKYIDHYLETYSGIHQYMEDTVKYAKFNGYVSTLFNRRRYIPELTQ
KNYAIRQFGERTAMNAPIQGTAADIIKKAMIDVHQAMLEKNVKSRLLLQVHDELIFEVPQ
EELDMMIELVTKTMENVVELQVPLKADYSYGPTWYDAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattagttttaatagacggaaatagtttaatgtaccgtgcatattatgcaaca
gcatatagcgggaatttaatgaagacaagcacgggtatttttacaaatgcgttatatggt
tttgtcaatatgatgaataaagtcatggatgagtataatcacacgcacatgctagtggcc
tttgatgcagggaaaaccacatttagacatgagtttttagatagttataaagatggacgt
aaaccgatgccagatgaactacgttcacaaattaatttaattaaaaaatatttagactta
ttaggagtgaaacgtttagaattaccgacttatgaagccgatgatattatcggaacatta
gcgacacttggtgagcaaacggattttgaaaaaattcatatcattacgggagataaagac
ttacttcaaatggccgatgaaaagacgacggttcatattacacgaaaaggggtaactgat
attgagtcatttacgccagaagcagtctttgctaaatatgaattatcaccaagtcagatt
gttgatctaaaagggttaatgggggatccatcagataacttaccaggaatcccaggggtt
ggagaaaaaacagcgattaaattattaaaacaattcggaacagttgaaaatctagtaact
catacagatgagttaaaagggaaaatgaaagaaaaagtggaagctaatgttgaacaggcc
ttgctttgtaaacgtatggcaacgattcatagagaagttccacttccagttacatttgac
gatttattctatcaaggaccagagacagcagaactcatgaacttctttaaggagatggag
tttaatgcctttctaaaaaaaatgaagcttgaagaagtaaaagaagaaaagccgaaagca
ccgattcgtatcattttagaagcgggagagttagaaacgttaagttatcaaaatagtgca
attcatgtagagatttttgaggaaaactaccatcaggctaatattttaggaattgcgatt
gtaaatgagacagacgcttattatgtgccttttgaagtggcaaaggaaagccaagcattc
atgtcatttttagcggatgaaggtgttaaaaaatcagtatttgatgtgaagcgttcacgt
gttgcgttaatgtggcaaggatttgatttacgtggtgttgattttgacttattattagcg
acatatgtcattaatccaacgaatgtaagtaatgaattcaaaaaagtagctctacattat
gattatgacgatgtgttatatgatgaagaagtgtatggaaaaggggcgaaacgtgcggtt
gcaccgattgagaaagtggcccaacattcgattgatattgcaactgcagtctttaagtta
aaagaaaccgcgcttgagcaattaaaagaacaagagcagttaagtttatttgaagagatg
gaaatgcctcttgctgaagtactagcagtgatggagtataacggaatgtctcttgatcta
acgacattagatgaaatgggtcaagatttaaaagggcgtattgaagcattagaatcccaa
atctttgatcatgtgggagcaccgtttaatatcaattcaccgaagcaattaggagaggta
ttattcgaaaaattagggttaccggttgttaagaaaacgaaaacaggctattcaacgaat
gcagatgtattagaaaagttaagtgatgctcatccaattattaaattaattatggagtat
cgtacgttaacgaaattgtattcgacttatattgaagggttgaaaaaagcgtgctatgaa
gatggaaaagtccacacgattttcaaccaggcgctgactcaaaccggacgtctttcttca
attgaaccaaatcttcaaaatattccgattcgcttagaggagggacgcatgattcgtcgt
gcgtttgtgccaagtcaagaaggatgggtgattttaggagctgactactcgcaaatcgaa
cttcgaattttagctcatatttcaaataccgagtcgttaattgatgccttcaaacatgga
ggggatattcataagaaaacagcgatggatgtctttaaagtgtcagaagaagagatgaca
tcagatttacgtcgctcagcgaaagcgattaacttcgggattatttatggaatgagtgcc
ttcggcttatcggaaaatttaaatattacacaaaaagaggcgaaaaaatatattgatcat
tatttagaaacttactcaggaattcatcagtatatggaagatacagtgaagtatgcgaag
tttaatggttatgtctcaacgttatttaaccgtcgtcgttatattcctgaattaacacag
aaaaactatgcgattcgtcaatttggtgagcgtaccgcaatgaatgctccaattcagggg
acagctgccgatatcatcaaaaaagcgatgattgatgttcatcaagcgatgcttgagaaa
aacgtaaaatcacgtttattacttcaagtacacgatgaattaatctttgaagttccacaa
gaagaactagatatgatgattgaattagtgacgaaaacaatggaaaacgtcgtcgaactc
caagttccattaaaagccgactactcatacggaccaacttggtacgatgctaagtaa
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