Turicibacter sp. H121: AT726_02760
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Entry
AT726_02760 CDS
T04254
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tur
Turicibacter sp. H121
Pathway
tur03030
DNA replication
tur03430
Mismatch repair
tur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT726_02760
03430 Mismatch repair
AT726_02760
03440 Homologous recombination
AT726_02760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tur03032
]
AT726_02760
03400 DNA repair and recombination proteins [BR:
tur03400
]
AT726_02760
Enzymes [BR:
tur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT726_02760
DNA replication proteins [BR:
tur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AT726_02760
DNA repair and recombination proteins [BR:
tur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AT726_02760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
ERCC3_RAD25_C
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AMC07980
UniProt:
A0A120IDM9
LinkDB
All DBs
Position
complement(559326..562367)
Genome browser
AA seq
1013 aa
AA seq
DB search
MGFTHLQVRSAYSLLNSSIKLADYVSLATSNQLKSLALVEEGSMHSAIKFYIACQKAGIK
PIIGMSLKIRGEGFEDEWTLLAKNSKGYETLLKLASLTALEDGGVDVEEVIAQSSNLIVI
TSGERGVLVSAIKQHQEECLNRYYHQYLKRLEHLYIGLLRVNHLTYEVSRHLIHWSERVG
LKTVALNDVRYIRKEDAKTLTFLRAIKENQSIGQTDIQDVERYFKTEEEMRALFADCPQA
IDMTEEIVASCTVKIPLHQQLLPKFPTPEGASSDSYLEALCYKGLMKRYGDNLSPVHKNR
LSYELSIIKEMGFADYFLIVWDFIKYAKMNQIFVGPGRGSAAGSIVSYVLGITNVDPIKY
NLLFERFLNPERISMPDIDIDFQDNRRDEVIQYVQTKYGSRCVVQIATFGTFQSRSAWRD
LARIHDVETQLINKVAGYIYSGVTLKDIYEQSRELREFFSSYPKLEVIYQEAMKIEGLPR
HTSIHAAGVIISDHDLTDYTAIMEGPTGVYVSQYEAEDLEAIGLLKMDFLGLKNLNMLQQ
IITLIKKKSDPTFDLTTIDFNDAKTYEMIAKGQTTGVFQLESEGMRQVLKKVCPTSLEDI
VACNALFRPGPMESIPLFAARKHHEQPVDYYHPSLQGILHNTYGIIVYQEQIMQIANVVS
GYTLGEADVLRRAVSKKKKDVLEEEERKFVAKAVERGYPIEIASQLYALILKFANYGFNR
SHAVAYSMIAYQMAYLKAHYPAYFMSVALTNVIGSERHTSQYIREAKQLNLSILPPSVNK
SGLSYQIEENQIRFSLLPIKHIGLNLARQLIEEREAGLFKSVYDFVVRTRRFMNQRAYEG
LIDVGALDEFGYNRTTLHHNLGAILDFSKYDGGLFETDFEIQVLHKDLSKLEMMKREKEL
LGFYLNSHPIHMLAKAAQENGWYYPSDIMNINLSQATFIGFVEKFREIRDKKGKLMAFMD
ITDEHMSLTVTVFSDVYTSEYKSLLGKVIAVNGRINMRNNEKNLNLSKIIAVS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgggatttacacatttacaggtacggtcagcctattctttattaaatagttctatcaaa
ttagctgattatgtgagtttagccacttcaaatcaattaaagtcattggctttagtcgaa
gaagggtcgatgcatagtgcgataaagttttatattgcatgtcaaaaagcagggattaaa
ccgattattgggatgagcttgaagattagaggtgaaggttttgaagatgagtggacgtta
ttagctaaaaatagtaaaggttatgaaactttattaaagttagcttctttgacagcacta
gaagatgggggagttgatgttgaagaggtaatcgcacaatcatcaaacttgatcgttatt
acgagtggcgaacgtggtgttttagtttctgctattaagcagcatcaagaagaatgttta
aatagatattatcatcagtatttaaagcgccttgaacatctctatattggacttttacgt
gttaatcatctgacgtatgaagtctctcgccatctgattcattggtctgaaagggttgga
ctaaagacagtggccttaaacgatgtacgttatattaggaaagaagatgcaaaaacttta
acgtttttgagagccattaaagagaatcaatcgattggtcaaactgacattcaagatgta
gagcgatattttaaaacggaagaggagatgcgtgctttatttgctgattgtccgcaggcc
attgatatgacagaggagattgttgctagctgtacagtaaagattccgttacatcagcaa
ttgttaccgaagtttcctacgcctgagggagcctcttctgatagttatttagaggcgtta
tgttataaagggttgatgaaacgttatggtgataacctgtcacctgttcataaaaatcgt
ttgagttatgagctgtctatcattaaggaaatgggatttgctgattatttcttgattgtt
tgggattttattaagtatgcgaagatgaatcaaatttttgttggcccgggtagggggtct
gctgctggatcgattgtgtcttacgttttaggaattactaatgtcgatccaattaaatat
aatcttttatttgaacgatttttaaatcctgaacgtatatccatgccagatattgacata
gattttcaagataatcgacgtgatgaagtgattcaatatgtacagactaagtatggttct
agatgtgttgttcagattgcgacatttggaacatttcaatcacgttccgcttggcgtgat
ttagcgcgtattcatgatgttgagactcagttaattaataaagtagcgggatatatttat
tctggcgttacattaaaggatatttatgaacaaagtcgtgagttacgagagttcttttca
agttatcccaagctagaagtgatttatcaagaagcaatgaaaattgaggggttacctcgt
catacttcaattcacgctgcaggggtcattattagtgatcatgatttaacggattataca
gcgattatggaaggaccgacgggagtttacgtgtcacaatatgaagcggaggatttagaa
gcgatcggtttattaaagatggattttttaggacttaaaaatttaaacatgcttcaacaa
atcattacattgattaagaagaagtctgatccaacgtttgatttaacgactattgatttt
aatgatgcgaagacttacgagatgattgcgaagggtcagacaactggggtgttccaacta
gagtctgaaggaatgcgtcaagttttaaagaaagtttgtccaacgtctttagaagatatt
gtggcatgtaatgctttatttagaccgggacccatggagagtattcctctttttgcagcc
cgtaaacatcatgaacagccagtagattattatcacccgagtttacagggtatcttacat
aacacttatggaatcattgtttatcaagaacagattatgcaaattgccaatgtcgtttct
ggctatacattaggagaagctgatgttttacgacgcgcagtttcgaaaaagaaaaaggat
gtattagaggaagaagagcgaaagtttgtggctaaagcagtcgaacgaggttatccaatt
gaaattgccagtcaactatatgctcttattttaaagtttgcgaattatggatttaatcgt
agtcatgccgtagcatatagtatgattgcttatcaaatggcatacttaaaagcacattat
cccgcttattttatgagtgttgctttaacgaatgtcattggaagtgagcgtcatacttca
cagtatattcgtgaagctaagcaattaaacttatctatcttacctccttctgtgaataag
agtggtttgagttatcagattgaagaaaatcaaattcgatttagcttgttaccgattaag
catattggtttgaatttagcgcgtcaattaattgaggaacgtgaagcgggattgtttaaa
tcggtatatgactttgttgttaggacaagacgatttatgaatcagcgagcatatgaagga
ttaattgatgttggagcattagatgagtttggatataatagaacaacactacatcataat
ttaggagctatcttagatttttcaaagtatgatggtgggttattcgagactgattttgaa
attcaagttttacacaaggatttatcaaagctagaaatgatgaagcgtgagaaagaatta
ttaggattttacttaaattctcatccgattcatatgctagcaaaagctgcccaggaaaat
ggctggtattatccaagtgacattatgaatattaatctatcacaagctacttttatcgga
tttgtagaaaaatttagagaaattagagataaaaaaggaaagttgatggcatttatggat
attactgatgaacacatgtcattaactgtaacggttttctcagatgtctatacaagtgag
tataaaagtcttttaggaaaagtgatagcggttaacggaagaattaatatgcgaaataat
gaaaaaaatctcaatcttagcaaaataatagcggtttcatga
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