Turicibacter sp. H121: AT726_06635
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Entry
AT726_06635 CDS
T04254
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tur
Turicibacter sp. H121
Pathway
tur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AT726_06635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tur03021
]
AT726_06635
03400 DNA repair and recombination proteins [BR:
tur03400
]
AT726_06635
Enzymes [BR:
tur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AT726_06635
Transcription machinery [BR:
tur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AT726_06635
DNA repair and recombination proteins [BR:
tur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AT726_06635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
AMC08611
LinkDB
All DBs
Position
1388604..1392329
Genome browser
AA seq
1241 aa
AA seq
DB search
MVDVNKFKYMKIGLASSDTIRKWSYGEVKKSETINYRTLKPEKDGLFCERIFGPQKDCEC
ACGKYKRIRHEGIVCDRCGVEVTVAKVRRERMGHIELAAPVAHIWYVKGIPSRMGLLLNM
SPRELEEVIYFVNYVVIDPGKTDLIKQKVLTEKEYREAYEKWGNAFQVGMGAEAIKKLLE
SLDLDKLAKELRSELKIAQGQKRGKVIKRLEVVESFRNSGNRPDWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLIRYLEIGAPNIIINNEKRMIQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKMYQCGLPKE
MALELFKPFVMKELVERDLAQNIKSAKKMIERMDDALWDVVEDVIREHPVLLNRAPTLHR
LGIQAFEPKIVEGRAIRLHPLVTTAFNADFDGDQMAVHVPLSQEAQAEARLLMLAANNIL
NPKDGKPVVTPSQDMVLGNYYLTMEEAGAIGEGNIYKDTNELMMAYANGYVTLHSRIALD
AKALNNMTFTEEQNSKYIITTLGKVIFNGILPKTFPYLNEPTMTNLQGATPTKYFVEKGT
DIKAHLADVKIVSPFKKKFLGDIISEVFRIYKTTETSRMLDRLKDLGFKYSTVAGISVGV
ADVVVSSKKKDLLKQGDDKVAQIQEFYNRGLLTDDERYRLVIDVWAKVKDEIQHVLMNEL
PADNHIYMMSDSGARGNASNFTQLAGMRGLMANPSGKTIELPIKSSFREGLTVTEFFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDKGQYITELKQRGQTVETLF
DRIVGRYTAKPIYHPVTKEKIAERNVYITDELGKAIIDAGIEGVDIRTIYSCNAQKGVCK
KCYGQNLATGKEVEVGEAVGIMAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRIQELF
EARNPKGRAIIAEIDGVITTIKANTKNRYEITLTNKLESRNYLLPYGVQPLVAEGDEVLA
GDMLTEGSIDPKELLRVKDVAAVQAYILKEVQNVYRAQGVELSDKHIEIMVHQMMKKVKV
IDGGDTDILPGSLIDMTHYTRVNAAAIMRGKRPAVGIPTILGITKASLETESFLSAASFQ
ETTRVLTDAAIKGKVDELIGLKENVIIGKLIPAGTGVLREDHIQPVHKIEDEVEEDILPF
DLTSDSKVSNDLVNLSLEDDLDELDIELDFDETDFLDAEDE
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
ttggtagatgttaacaagtttaagtatatgaagatcggtttagcatcttcagatacaatc
cgtaaatggtcttatggtgaagttaaaaaatctgagacaatcaactatcgtacattaaaa
cctgaaaaagatggattattctgtgagcgtatcttcggtccacaaaaagactgtgagtgt
gcttgtggtaaatataaacgtattcgccacgaagggatcgtttgtgatcgctgtggtgta
gaagtaacagtagcaaaagttcgtcgtgaacgtatgggtcacatcgaacttgctgcacct
gttgcacatatttggtatgtaaaaggtattccaagccgcatgggactattattaaatatg
tctcctcgtgagcttgaagaagttatctactttgtaaactatgttgtaattgacccaggt
aaaactgatttaattaaacaaaaagtattaactgaaaaagaatatcgtgaagcatatgaa
aaatgggggaatgcattccaagtaggtatgggtgctgaagccattaaaaagttattagaa
tcattagatttagataaattagcgaaagaattacgttctgaattaaaaattgcacaaggt
caaaaacgtgggaaagttatcaaacgtttagaagttgtggaatcattccgtaattcagga
aaccgtcctgattggatgatcttagacgtattaccggtaattccaccagaattacgtcca
atggttcaattagatggtggacgttttgcaacatctgacttaaatgatttatatcgtcgt
gttattaaccgtaataaccgtttaattcgttatttagaaatcggtgcgcctaatattatc
ataaacaatgagaaacgtatgattcaagaagcagtagatgctttaattgataatggtcgt
cgcggacgtccagttactggcccaggaaaccgtccattaaaatcactttctcacatgtta
aaaggtaaacaaggtcgtttccgtcaaaacttattaggtaaacgtgttgactactctgga
cgttctgtaatcgtagtaggaccagacttaaagatgtatcaatgtggattaccaaaagaa
atggctcttgagttattcaaaccattcgttatgaaagaattagtggaacgtgatttagca
caaaatattaagagtgctaagaaaatgattgagcgcatggatgatgcattatgggacgtt
gtagaagacgtaattcgtgagcatccagtattattaaaccgtgccccaacattacaccgt
ttaggtatccaagcgttcgaacctaaaattgtagaaggacgcgcaattcgtcttcaccct
cttgtaacgacagcatttaatgccgacttcgatggtgaccagatggcggttcacgttcct
ttatctcaagaagcacaagctgaagctcgtttattaatgcttgctgcaaataacatctta
aacccgaaagatggtaaaccagtcgttactccatctcaggatatggtattaggaaactac
tacttaacgatggaagaagcaggagcaattggtgaaggtaatatctataaagatacaaat
gagttaatgatggcttatgcaaacggatatgtaacattacactctcgtattgcattagat
gctaaagcattaaataacatgactttcactgaagagcaaaatagcaaatatatcatcaca
actttaggaaaagttatcttcaatggtattttacctaaaacattcccttacttaaatgag
ccaacaatgacgaacttacaaggtgctacaccaactaagtacttcgttgaaaagggaaca
gatattaaagcacacttagcggatgttaaaattgtttctccattcaagaaaaaattctta
ggggatatcatttctgaagtattccgtatttataaaacaactgaaacatcacgtatgtta
gaccgcttaaaagacttaggatttaagtattctactgttgccggaatttctgtaggggtt
gctgacgtagtcgtatcttctaagaaaaaagatttattaaaacaaggtgacgataaagtt
gctcaaattcaagagttctataaccgtggtttattaactgatgatgaacgttatcgttta
gttattgatgtttgggcgaaagtaaaagatgaaattcaacatgtattaatgaatgagtta
cctgctgataaccacatttacatgatgagtgattctggagcccgtggtaacgcatcgaac
tttacgcagttagccggtatgcgtggattaatggccaacccatctggtaaaacaatcgag
ttaccaatcaaatcttcattccgtgaaggtttaacagtaactgagttcttcatctctacc
catggtgctcgtaaagggttagcggatacagccttaaaaacagccgattcaggttactta
actcgtcgtttagtagacgtagcacaagatgtgatcgttcgtgaagatgactgtggtaca
gataaaggacaatatatcactgaattaaaacaacgtggtcaaacagtggaaacattattt
gatcgtatcgttggacgttatacagcaaaacctatctatcatccggtaacgaaagaaaag
attgcagaacgcaatgtatatattacagatgaattaggtaaagctatcatcgatgctggt
attgaaggagtagatatccgtactatttactcatgtaatgctcaaaaaggtgtatgtaaa
aaatgttatggtcaaaacttagcaactggtaaagaggttgaagttggggaagctgttggt
atcatggctgctcaatcaatcggtgagccaggtactcagttaacgatgcgtacattccat
acaggtggggtagccggagccgatattacacaaggtttacctcgtatccaagagttattc
gaagcgcgtaatccaaaaggacgtgcaatcattgctgaaatcgatggtgtaattactaca
attaaggcaaatactaaaaaccgttatgaaattacattaacaaataaattagaaagccgt
aactacttattaccttacggggtacaaccattagtagctgaaggtgatgaagtattagct
ggagacatgttaactgaagggtcaatcgatcctaaagaattattacgtgttaaagatgtt
gccgctgtacaagcatacatcttaaaagaagtgcaaaatgtataccgtgcacaaggggta
gaattatcagataagcatattgagatcatggttcatcaaatgatgaaaaaagttaaagtt
atcgacggtggagatactgacattttaccaggatcattaattgatatgactcattatacg
cgtgtaaatgctgctgcaatcatgcgtgggaaacgccctgcagtaggtattccaacaatc
ttaggtatcacaaaagcatctcttgaaacagaatcattcttatctgctgcatcattccag
gaaacaactcgcgttcttacagatgctgcaatcaaaggtaaagtggatgaattaatcgga
ttaaaagaaaatgttatcattggtaagttaatcccagccggaacaggtgttttaagagaa
gatcatattcaaccggtacataagattgaagatgaagttgaagaggatattttaccattc
gatttaacttcagattcaaaagtatcaaatgatttagtaaatctttcattagaagacgat
ttagatgaattagatatcgaattagatttcgatgaaactgattttttagacgctgaagat
gaataa
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integrated database retrieval system
