Turicibacter sp. H121: AT726_06800
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Entry
AT726_06800 CDS
T04254
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tur
Turicibacter sp. H121
Pathway
tur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AT726_06800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tur03021
]
AT726_06800
03400 DNA repair and recombination proteins [BR:
tur03400
]
AT726_06800
Enzymes [BR:
tur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AT726_06800
Transcription machinery [BR:
tur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AT726_06800
DNA repair and recombination proteins [BR:
tur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AT726_06800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AMC08644
LinkDB
All DBs
Position
1411331..1412275
Genome browser
AA seq
314 aa
AA seq
DB search
MLEIEKPRIEVEEYIKDEFYGKFVIEPLKRGYGTTLGNSLRRVLLSSLPGAAVTSISIEG
VQHEFTSIDGVVEDVTQIILNLKNLILSIDSEEVKELRIDVAREGAVTAADIECDEQVEI
INPDLHIATLSATGRLRMTMKARRGNGYVGADDNKKLLESAGEIAIDSIYTPVTRVSYDV
EKTRVGQDASYDKLTLEVWTNGSVNPQEAISLASKILVEHFSILVNLNEAGQLASFIVER
EDEEKNKVLEMPIEELDLSVRSYNCLRRAGINTVEELARHSEEDMMKVRNLGKKSLKEVK
DKLDELGLSLGCTK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatcgaaaaaccaagaattgaagttgaagaatacatcaaagatgaattctat
gggaaatttgttattgagcctctaaaacgtggatatggtactacgttagggaattcctta
cgtcgagtattactatcatcacttcctggagctgcagtaacatctatctctatagaggga
gttcaacatgaattcacttctatcgatggtgtagttgaagatgtaacacaaattatttta
aatttaaaaaacttaatcttatctattgattcagaagaggttaaggaattacgtattgat
gttgctagagaaggtgcagttacggctgcagatatcgaatgtgacgaacaagtagaaatt
atcaatcctgacttacacattgctactttatcagctacaggtcgtttacgaatgactatg
aaagctcgtcgtggtaatggttatgttggtgcggatgataataaaaaattacttgagagt
gcaggagagatcgctatcgactctatctacacaccagtaactcgcgtatcttatgatgtt
gaaaagactcgtgttggtcaagatgcatcatacgataaattaacattagaagtttggaca
aacggaagtgttaacccacaagaagctatctctttagcatctaaaatcttagttgaacac
ttcagcattctagttaacttaaatgaagcagggcaacttgcatcattcatcgttgaacgt
gaagatgaagagaaaaacaaagtattagaaatgccaattgaagagttagacttatctgtt
cgttcttacaactgtttacgtcgtgctggaatcaatacagttgaagaattagctcgtcat
tctgaagaagatatgatgaaagttcgtaacttaggtaaaaaatcattaaaagaagttaag
gataaacttgacgaattaggattaagcttaggttgcactaaataa
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