Turicibacter sp. H121: AT726_09660
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Entry
AT726_09660 CDS
T04254
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tur
Turicibacter sp. H121
Pathway
tur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AT726_09660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tur03400
]
AT726_09660
DNA repair and recombination proteins [BR:
tur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AT726_09660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Rad17
AAA_14
AAA_22
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AMC09139
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Position
2030815..2033514
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AA seq
899 aa
AA seq
DB search
MRDKSKYTPMMQQYLTIKENYQDAFVFFRLGDFYELFFEDAQLASKELEIALTGREAGAE
ERVPMCGVPHHSAENYINRLIERGYKVAVCEQVEDPASAKGVVRREVVRLLTPGTVMNQT
ALNEKENNFILSVVSFEDAYAIAYSDLSTGENYAMRLPKEDQSLVGELISLGCKEIVIGS
DVDVKIFDNLRALKQIVLSYEEERLIPIEYQILAEEVNDGYLTQAFGRLVNYLVRTQKSA
LGHLQPISLTKNEDYLSIDYNSRRNLELTETIRSKSRQGSLLWLLDKTKTAMGSRLLKQW
IERPSINAQMINERLDVVESFMSDFMLKEELKRHLDEVYDLERLSGRIAFGNANARDLLQ
LNSSLNQIPHIKALLSQLPMPTIQQQLARMADCSHITDILEKAIVDNPPIGIKEGGIIKD
GYHETLDEYRYIVTHGKEWILALEAAEREKTGIRSLKIKYNKVFGYYIEISKANLHLIPE
DAGYERKQTLVNAERFITKELKEKENLILNAEEKSIQLEYELFSELRQLVKNEIPKIQQI
AKVMAYFDVLQSFATISEENRYTRPQLNREHIIDIKDGRHPVVEKVLKDTQYVENDCVMP
SDLSILLITGPNMSGKSTYMRQLALIAIMAQIGCYVPASVANVPIFDQIFTRIGAADDLV
SGHSTFMVEMMETNYALEHATKDSLILLDEIGRGTATFDGMALAQSIIEYVHDKVGAKTL
FSTHYHELTQLEEKCEHLENRHVRAEEHEGQLIFMHKVMEGPSDKSYGIHVAQIAKLPTS
LISRAKQLLDALEQDKTAIQNSLETAVKVEAQPVQDLPVVKEPEVKLQPVLEAEQGQLSL
FGVVESPKKEKAKVEVKVEYVNPYEDIIKELDQIDLYQLTPMQAMNVMYELKVKMNQRK
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcgagataagtctaaatacacacctatgatgcaacaatatttgactatcaaagagaat
tatcaagacgcctttgtcttttttagattaggtgatttttatgagctattttttgaagat
gcccaattagcatcaaaagaattagaaattgcgctaactggtcgtgaagcaggagctgaa
gaacgtgttcctatgtgtggggttcctcatcactcagctgaaaattatattaatcgttta
attgaacgtggttataaagtggcggtttgtgagcaggttgaagacccagcgagtgcgaaa
ggggttgttcgccgtgaagtcgttcgtttattaacaccaggaacagtcatgaatcaaacg
gcattaaatgaaaaagaaaataactttattttatcagtcgtttcttttgaggatgcctat
gctattgcgtacagtgatttatcaaccggagaaaactatgcgatgcgtttaccgaaagag
gatcaatcattagtcggggaattaattagtttaggatgtaaagaaatcgttattggatct
gacgttgatgttaaaatatttgataacttacgtgcactcaaacaaatcgtgttatcgtat
gaagaagaacgcctgattccaattgaatatcaaattttagcagaggaagtgaacgatggt
tatttaacgcaagcctttggtcgtttagtcaactatctagttcgtacgcaaaaaagtgca
ctcggtcacttacaaccgattagtttaacaaagaatgaagactatttaagcatagattat
aattcacgccgaaacttagagttaacagagaccattcgttcaaaatcacgtcaaggttca
ttactttggttacttgataaaacaaagactgcaatgggaagtcgtttattaaaacaatgg
attgaacgtccatcaattaatgcacaaatgattaatgaacgtttagatgtagttgaatca
ttcatgagtgattttatgttaaaagaggagttaaagcgtcacttagatgaagtttatgac
ttagaacgtttatcagggcgtattgcgtttggaaatgcgaatgcacgtgatttattacaa
ttaaactcgtcattaaatcaaatcccgcatattaaagcattattgagtcaattgccaatg
cccaccatccagcaacaattagctcgtatggcggattgttctcatattacggatatttta
gaaaaagcaatcgttgacaatccacccattggaattaaagagggtggtatcattaaagat
ggctatcatgagacactagatgagtatcgttacattgtgacacatgggaaagagtggatt
ttagcattagaagcggccgaacgtgaaaagacagggattcgttcgttaaagattaaatat
aacaaagtgtttggttactatattgaaattagtaaagcgaacttacacttaattcctgaa
gatgctggttatgagcgtaaacaaacgttggttaatgcggagcgcttcattaccaaagaa
ttaaaagaaaaagaaaatttaattttaaatgcagaagaaaaatcgattcaattagaatat
gaattatttagtgagttacgccaacttgttaaaaatgagattccaaagattcaacagatt
gcaaaagtgatggcttattttgatgtccttcaatcctttgcaacgattagtgaagagaat
cgctatacacgccctcaattaaatcgtgagcatatcattgatattaaagatggacgtcat
ccagtagttgaaaaggtattaaaagacacacaatatgttgaaaatgattgtgtgatgcca
tcagatttatccatcttgttaataacaggtcctaacatgtcggggaaatcgacgtacatg
cgtcaattagctttaattgccattatggctcaaatcggatgttatgtgccggcaagtgtc
gctaatgtaccaatctttgatcaaatttttacacgtattggtgcagctgatgatttagtt
tcaggacatagtacatttatggttgaaatgatggaaacgaattatgcgcttgaacatgct
acgaaagatagtttaattttacttgatgaaattggacgtggaacagcaacgtttgatgga
atggccttggcacaatccattattgagtatgttcatgataaagtcggagcgaaaacatta
ttctcgacacactatcatgagttaactcaattagaagagaagtgtgagcatttagaaaat
cgtcatgtgcgtgctgaagagcacgaaggacaattaatcttcatgcataaggtcatggaa
ggaccatcagataagagttacgggattcatgtcgcacagattgcaaagcttccgacaagt
ttaatttctcgtgcgaaacaattattagatgcgcttgaacaagataaaacagccattcaa
aactcactagaaacggcagtgaaagtggaggcacaacctgttcaagatctcccagtagta
aaggaaccagaggtaaagctacaaccagttcttgaagctgagcaaggacagctttcgtta
tttggagttgtagaatctccgaaaaaagaaaaagcaaaagttgaagttaaagtagaatat
gtaaatccttatgaagatatcattaaggaactagatcagattgatttatatcaattaaca
ccaatgcaggcgatgaatgtcatgtatgaattaaaggtgaaaatgaatcaaagaaagtag
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