Turicibacter sp. H121: AT726_10715
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Entry
AT726_10715 CDS
T04254
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tur
Turicibacter sp. H121
Pathway
tur03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tur00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AT726_10715
09124 Replication and repair
03420 Nucleotide excision repair
AT726_10715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tur03021
]
AT726_10715
03036 Chromosome and associated proteins [BR:
tur03036
]
AT726_10715
03400 DNA repair and recombination proteins [BR:
tur03400
]
AT726_10715
Enzymes [BR:
tur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AT726_10715
Transcription machinery [BR:
tur03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AT726_10715
Chromosome and associated proteins [BR:
tur03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AT726_10715
DNA repair and recombination proteins [BR:
tur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AT726_10715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
PDDEXK_1
ResIII
DEAD
HBB
Helicase_C
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
AMC09322
UniProt:
A0A109RMT5
LinkDB
All DBs
Position
2240911..2243202
Genome browser
AA seq
763 aa
AA seq
DB search
MIIRKGIKEVVSYVYQQGDLNLEYFQANRAQYGTEVHQVIQDQYLDEECEVYLEHILSLD
EHEIHLSGRMDLLLERDGRWIVGEIKSTTRKLEVIEENDRPAHYAQAKMYAYLLLCQHLD
WEEITLRLIYCDLEGINQRCFDQIYTKEMLEPFVQETLRIYLDWYLILLRSMELKLKTAK
TLQFPFGDFRAYQRELSGAVYQCVKQKKRLLLRAPTGIGKTMGTIFPSIKALTEHEQKIF
YLTAKTIGRSVAEKAFDTCLANGWQAKVTTITAKEKICLMDEVKCDPSYCSYAKGYFDRI
NEATKDLFESEQLFNRDRIVSYAKKHSVCPFEYSLAMASISDAVIGDYNYMFDPRAYLRR
FFDEPSPHIALIDEAHNLYDRACDMYSASLTKAPIQELKRLFKDRHKPLAKVLGALNLKF
IEYRHELEEKKVYDLFKDDIDKVFLTKIQSLLDALEKYLYRHPETEYKPQLMNLYFDCHQ
FLRISDYYNDSFRVRYERSGIEVKISLICLNPSLYLSEKMERVRSSILFSATLHPLSYYH
TVLLHDEECEQIFLPSPFDREHLDLYVHHGISTKYKQRDQTLAPLISTIYQVTRNQQGNY
LVFFPSYQYLEMVYEAYKELIDDEQRLLKQEREMDESAREAFLDSFQANSSETLVAFAVL
GGVFSEGIDLIGNRLIGSIIVGVGLPQINPLTEQRRLYFEEAFKKGYLYAYLYPGFNKVM
QAVGRVIRTNEDSGIVMMIDERYIEPTYLSLFPYEWQHAKFLK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgattattcgtaaaggaatcaaagaagtcgttagttacgtatatcagcaaggcgattta
aatttagaatattttcaagcgaatcgtgcgcagtatggaacagaggttcatcaagtcatc
caagatcaatatttagatgaagagtgtgaagtttatttagaacatattttatcattagat
gaacatgagattcatttaagtggtcgaatggatttattactagagagagatggaagatgg
attgttggagaaattaaatcaacgacacgcaagctagaagtaattgaagagaatgatcga
ccagctcattatgctcaagccaagatgtatgcttatttactattatgtcagcatttagac
tgggaagaaataacgcttcgattgatctattgcgatttagagggcattaatcaacgttgt
tttgatcaaatatatacgaaagaaatgttagaaccgtttgttcaagaaacgttacgtatt
tacttggattggtacttgattttattacgttcgatggagttaaaattaaaaacagctaaa
accttacagtttccatttggagattttcgagcttatcaacgagagttatcaggggcggtt
tatcaatgtgttaaacaaaagaaacgacttttattacgagctccaacagggattggcaag
acaatgggaactatttttccaagcatcaaagccttaacagaacatgaacaaaaaatcttt
tatttaactgctaaaacgattggccgtagcgtggcagaaaaagcctttgatacttgctta
gccaatggatggcaagccaaagtgacaacgattacggcaaaagagaaaatttgtttaatg
gatgaagtaaaatgcgatccaagctattgttcttatgctaaaggttattttgatcgaatt
aacgaagcaactaaagatctatttgagtcagaacaactgtttaatcgtgatcgaatcgtg
agttatgctaaaaagcacagcgtctgtccatttgagtattcgttggcaatggcgtcgatt
agcgatgccgtgattggagattataactacatgtttgatccacgtgcttacctccgtcgc
ttttttgatgagccgtcaccccatattgccttaattgacgaggcacataatttatatgat
cgagcttgcgacatgtatagtgcttccttaactaaggcgccgattcaagagctgaaacgt
ttatttaaagaccggcataaaccattagcaaaggtattaggggctttgaatttgaaattt
attgagtatcgtcatgaacttgaagaaaagaaagtttatgatttatttaaagatgatata
gataaagtttttttaacaaagattcaatcccttcttgatgcgttggaaaaatatttatat
cggcaccctgagactgaatataaaccccaattaatgaatttatattttgattgtcatcaa
tttttgcgaatttctgattattacaatgacagttttcgcgttcgttatgaacgatcgggg
attgaagtcaagataagtctgatttgtttaaatccaagcctttatttaagtgaaaaaatg
gagcgagttcgatcaagtattttattttcagcgaccttacatccactgagctattatcat
actgtcttacttcatgatgaggagtgtgagcaaatctttttaccctcaccttttgatcgc
gagcatttagatttatatgtccatcatggcatttcaacgaagtataagcagcgggatcaa
acgcttgcccccctgatttcaacaatttatcaagtaactagaaaccagcaggggaattat
cttgtattctttccatcgtatcaatatctagagatggtgtatgaggcgtataaagaatta
atagacgatgagcaacgtttattaaaacaagagcgtgagatggatgagtcagctcgtgaa
gcctttttagattcattccaagccaattctagtgaaactttggtggcatttgctgtttta
ggtggtgtttttagtgaagggattgaccttattggaaatcgactgattggttctattatt
gttggagttggacttccgcaaattaatcctttgacggaacagcgtcgactttattttgaa
gaagcttttaagaaaggatatttatatgcctatctttatccggggtttaataaagtcatg
caagcagtaggacgtgtcattcgaacaaatgaagatagcgggattgtcatgatgattgat
gaacgttatattgaacccacgtatttatcactctttccttatgaatggcaacatgcaaag
tttttaaaataa
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