Tetranychus urticae (two-spotted spider mite): 107359048
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Entry
107359048 CDS
T04901
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03013
Nucleocytoplasmic transport
tut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107359048
03015 mRNA surveillance pathway
107359048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107359048
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107359048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
PRIMA1
Motif
Other DBs
NCBI-GeneID:
107359048
NCBI-ProteinID:
XP_015780978
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MSDTKVMEKEFTEDELAGGESLVDDEDLSDEEYVEALGEHDEGGKKNHESPKHGSHQHKE
KVSKDKDSRAEKEKPKGECEDIDSVKIESEDNDKDELHSVETSKVSTEPVDKIAVTIEES
DENTDNLLEDGEDDDEDDDGEVENDEEEDEEDDGSIEGEREEGDGQESNEISKQTDKELD
DDEDRRNPQYIPKRGAFYEHDDRLGTDEEVDEEEEPEKPEAVEKKTEPVVEVRKPKKLWS
DDGKWGHDMFDDDEQKPKPRDEIVSTYGYDIRNEDGPPKARRRRRYGRGPNRYTRSWKDE
GAYSSPKDVISKVKPKVDDNVKRDKEPRPVTLKESEEKRPSSNRRSGSGGRSRNEPKSVF
KANDRDRDRDQSRGKEGKDIGLGRERNRERERDRDRRRYDHNRSPGPSKDLRDSVLKTDK
DLKRNQKDFSENDFPELPQKTREKIRPIQQVTTGDANQPNAWSKSRPKHSNARDIIREGE
GSEEFKSEPMKVVENFENSKRLFNLPDSNKIEIVKTQTFENSRYFNRRHLTKNHHQEPTN
VKKDLALHRNNRGRPRQGERDVRNSGEIGRPITKTSHLADDYEEDPSGSGTIDQHRRGRY
NIGKERELRDYRSNHHGLEDRDRRGSEEPRGRSYIDDRHFDGHFGDNQGEISVGMSKLSI
DKSRLADDSNLSKPKRYSSLRQHQTQQQHQHQLQQSEPHPAKHQQQQHAHKQPQSQPPQQ
SIDNQPNSNLNQYPATSQHITMGHSRQTTNVQYYEATSGANQQPSASYYIDNRSPQSSFG
YIPTTNIEGATNATRFLSQIAPRFIPPPPAPPPPPPEPRFMAQAVAAAAAANPATAGAGT
LPPVISGPPAATYLPTYPPGYPQYPPPPPAAAQFSIAPPPPPSASELYRGGVTYYDTMTQ
QVSPRQLPQRRPKNALPIVPPPDLSNSDATGYDDQSDLNQNVETVSC
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatactaaagtaatggaaaaagaattcaccgaggatgaattagcgggcggtgaa
agtttggttgatgatgaagatctgtcagacgaagagtatgttgaagctctaggtgaacat
gatgaaggtggtaagaaaaaccacgaaagcccgaagcatggttcacatcaacacaaggaa
aaagtatctaaagacaaagattcaagagctgaaaaagaaaaaccaaaaggagaatgtgaa
gatatagatagcgtcaaaattgaaagtgaagataatgataaagatgaattacacagtgtt
gaaacatccaaagtttcaaccgaacctgtagataaaattgctgtaaccattgaggaaagt
gatgaaaatacagataacttattagaagatggagaagatgatgacgaagatgatgatggt
gaagtagaaaacgatgaagaagaagacgaggaagacgatggatctatcgaaggtgaacga
gaagaaggggatggtcaggaaagcaatgaaatctccaaacaaacggataaagaattagat
gacgatgaagacagacgcaatcctcaatatattcctaagagaggggccttttatgaacac
gatgatcgtctaggaactgacgaggaagtggatgaagaagaggagcccgagaagcctgag
gctgtagagaaaaaaactgaaccagtagttgaagttcgaaaaccgaaaaagctttggtct
gacgatggcaagtggggccatgatatgttcgacgatgatgaacaaaaaccaaaacctaga
gatgaaattgtctctacctatggttatgacattaggaatgaagatggtccccctaaagca
agaagacgccgtagatatggacgaggtccaaatcgatatactagaagctggaaagatgaa
ggggcttactcaagcccaaaagatgttataagtaaagtgaaaccaaaagtcgacgacaat
gttaaaagagacaaagagccaagaccagttactttgaaagaaagcgaggagaaaaggcct
tctagtaatagaaggagtgggtccggaggtcgttcgcgaaatgaaccaaaatcagtcttc
aaagctaatgatcgtgatcgagatcgtgatcaatcaagaggaaaagaaggcaaagatatt
ggacttggtcgtgaacgaaatcgtgaacgtgaaagagatagagatcgtagaagatatgac
cataacagaagcccaggaccatcgaaagaccttagggatagtgttttaaaaactgataaa
gacttaaaaaggaatcaaaaagatttcagtgaaaacgattttcctgagcttccacaaaag
accagagaaaagatacgaccaattcaacaagtgacaacaggtgacgcaaatcaacccaat
gcctggagtaaatcaagaccaaagcattctaatgctagagatataatccgtgagggagaa
ggttccgaagaatttaaatcggaaccaatgaaagttgtggaaaactttgaaaatagtaaa
agactattcaatcttccggacagtaacaaaatcgaaattgttaaaacacagactttcgag
aactcacgatattttaaccgacgtcatttaaccaaaaatcatcaccaagaaccaacaaat
gttaaaaaagatttggctttacaccgtaacaatagaggaagaccaaggcaaggtgaaaga
gatgtcagaaacagtggagagattggtcgaccgatcacaaaaactagtcacttagccgat
gactatgaagaagatcctagtggcagtggaaccattgatcagcacagacgaggacgatat
aatattggcaaagaaagagaactcagagactacagaagcaatcatcatgggttagaagac
cgagatcgtcgcggatctgaagaacccagaggtagaagttatattgatgatcgacacttc
gatggccattttggcgataatcaaggtgaaattagtgttggaatgagtaaattaagcata
gataaaagccgattggcggacgattctaatttatcaaaaccaaagcgctactcatcgttg
aggcagcatcaaactcaacaacaacaccaacaccaacttcagcagtcagaacctcacccg
gcaaaacatcaacaacaacaacatgcacataaacaacctcaatctcaacccccacaacaa
tcaattgataaccaacctaattcaaatttgaatcagtacccagctacttcacaacacata
acaatgggccactctagacagactacgaatgttcaatattatgaggcaacttctggtgcc
aatcaacagccttcagcgagttactacattgataatcgatctccacaatcttcatttggt
tacatacctacaaccaatatcgaaggagcaacaaacgctactcgctttctttctcaaata
gcacctcgttttattccacctccaccagcccctcctccaccgccacctgaaccacgcttc
atggctcaggctgtggctgccgctgccgctgctaacccagcaaccgctggagctggtaca
ttgcctcctgtgatctctggtcctccagcagctacctatctgccaacttatccacctggc
taccctcaatatccaccgcctcctcctgcggcggcacagttttctattgccccacctcca
ccaccttctgcgtctgaattataccgtggtggtgttacttattatgatacaatgactcaa
caagttagtcctagacagttaccccagcgaagacctaaaaatgcccttcccattgtccca
cccccagaccttagcaattctgatgccactggttatgatgatcaaagtgatttgaatcaa
aacgttgaaacagtctcttgttaa
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