Tetranychus urticae (two-spotted spider mite): 107359189
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Entry
107359189 CDS
T04901
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107359189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tut03041
]
107359189
03009 Ribosome biogenesis [BR:
tut03009
]
107359189
Enzymes [BR:
tut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107359189
Spliceosome [BR:
tut03041
]
Complex A
U1 snRNP components
U1 related factors
107359189
Complex B
107359189
Ribosome biogenesis [BR:
tut03009
]
Eukaryotic type
Pre-60S particles
Helicases
107359189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107359189
NCBI-ProteinID:
XP_015781149
UniProt:
T1JRV6
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MSDRNYGGGYNSYNRGYNYNNTPTPKPPANLIVKSDFYTDVNVRSTYRDEEVTTFRDKEG
ITIKGNDVPPPSMDFGDYPWPKFISAGFARQGYDKPTPIQAQGWPIALAGRDMVGIAQTG
SGKTMSYVIPAFIHIDSQLNERQDYGPMALVLAPTRELAQQIQDVVNHFQTRFGNVCVFG
GASKGPQIKEITRNRPMLVIATPGRLNDFIESGIISLANISYLVLDEADRMLDMGFEPQI
RKIISTLSMTKRQTLMWSATWPKEVRTLAEDFLRNHIQINVGALQLHANHNITQIVEVCG
DMEKKERLFNLLTEIVRENSENKIIVFAETKRKVDDLTKQLKYSNWPAMCIHGDKSQAER
DWVLKEFRSGRAPILVATDVAARGLDVEDIKYVINFDYPNSSEDYVHRIGRTGRKNKKGT
AYTFFTRGNSKQANDLINVLKEANQTVNPQLLELSRFSGGPDKFRRYGSGSGRNGFIPKN
SYGSGRAGGNSYGSSYGSSYGSYGSSNDNNGGYAQKRKFDSYDSSSHSNLKKPNYESSYS
SAPRYN
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccgaaattatggtggtggctacaacagttacaatcgtggctataattacaat
aataccccaactccaaagcctcctgcaaatctaatagttaaaagtgatttttatactgat
gttaatgtgcgttctacttatcgagatgaagaagttacaacgttcagggacaaagaaggt
attactatcaaaggaaatgatgtccctccaccaagcatggactttggcgattatccctgg
cctaaatttatttctgccggttttgccagacaaggttatgataagccaactcctattcaa
gctcagggctggcctatagctttagctgggcgagatatggttggtattgcccaaactggt
agtggaaagactatgtcttatgtaattcctgcttttattcatattgattcccaactgaat
gaacgacaagattatggtccaatggctttggttcttgctccaactcgagagcttgctcag
cagatccaagatgtagtcaaccattttcaaacccgattcggcaatgtctgtgtatttggt
ggtgcttcaaaaggccctcaaatcaaagaaatcactcgcaacaggccaatgcttgtcatc
gccactcctggtcgactcaatgactttatagaaagcggtatcattagcctagccaatatt
agttatcttgttctagatgaagctgatcgtatgttagatatgggttttgaaccccaaatc
agaaagataatttccacacttagcatgactaagcgacaaacccttatgtggtcagccaca
tggccaaaggaagtacgtactttagctgaagattttcttcgtaatcacattcaaataaat
gttggtgctctccaactacatgctaaccacaatattacccagattgttgaggtttgtggt
gatatggagaagaaagaaaggcttttcaatcttcttactgaaatagtgagagagaacagt
gaaaataagataatagtttttgctgagaccaagagaaaggttgatgacttaacaaagcag
ttaaaatactctaactggcctgctatgtgcattcatggcgacaaaagtcaagctgaaaga
gattgggttttgaaagagttcagaagtggacgggctcctatcttagtcgctactgatgta
gctgcccgaggacttgatgttgaagacataaaatatgttatcaactttgactatcctaac
tcaagtgaggactatgtccatcgaattggacgaactggtcgtaaaaacaaaaaaggaact
gcatacactttcttcaccagaggcaactctaaacaagccaatgacttgatcaatgttctt
aaagaagctaatcaaacagtaaaccctcaactactcgaattgtctcgatttagcggtgga
ccagataaattccgtcgatatggttcaggttcaggtagaaatggtttcattccaaagaac
tcctatggctccggaagagcaggaggaaatagctatggaagctcttatggaagctcctat
ggaagctatggtagctctaatgacaataatgggggttatgcccaaaagaggaaatttgac
tcatatgattcttcatctcattctaatcttaaaaaacctaattacgaaagttcttactca
tcagcacctcgttacaattga
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