Tetranychus urticae (two-spotted spider mite): 107359198
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Entry
107359198 CDS
T04901
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107359198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tut03041
]
107359198
03009 Ribosome biogenesis [BR:
tut03009
]
107359198
Enzymes [BR:
tut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107359198
Spliceosome [BR:
tut03041
]
Complex A
U1 snRNP components
U1 related factors
107359198
Complex B
107359198
Ribosome biogenesis [BR:
tut03009
]
Eukaryotic type
Pre-60S particles
Helicases
107359198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
SNF2-rel_dom
CMS1
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
107359198
NCBI-ProteinID:
XP_015781161
UniProt:
T1JRZ5
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MSSYRSYGAGYNNNRGGGGGGYHRNNTPTPKPPANLTVKSDFYTGVNVRSDYSEQDITVF
REKEGITIRGSNVPPPIMEFTDYPWPKSISAGFSRQGYDKPTPIQAQGWPIALAGRDMVG
IAQTGSGKTMSYIIPAFIHIDSQLNERRDYGPMALVLAPTRELAQQIQEVVNHFQTRFGN
VCVFGGASKGPQIKEITRNRPMLVIATPGRLNDFIESGIISLANISYLVLDEADRMLDMG
FEPQIRKIIATITMAKRQTLMWSATWPKEVRTLAEEFLQDYIQINVGALQLHANHNITQI
VEVCGDMEKKEKLFSLLTEIVKENSENKIIVFAETKRKVDDLTKQLRYSNWPAMCIHGDK
SQSERDWVLKEFRSGKAPILVATDVAARGLDVEDIKYVINFDYPNSSEDYVHRIGRTGRK
NKKGTAYTFFTKGNSKQANDLINVLKEANQTVNPKLLELSRFGGGPDKYRRYGSSRNGFI
PKNSYNSGRGGGGNGYNNSYGNNSNGNGAGYPQKRKFDSFDAASNSNAKKPYYDSSYSSG
SRFN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcatatagaagctacggtgccggttataataataatcgtggtggtggtggtggt
ggttatcatcgtaataataccccaactccaaaacctcctgctaatttaacagtgaaaagt
gatttttacactggagtaaatgtgcgatctgactatagtgaacaagatataaccgttttc
agagaaaaggaaggtatcaccatcagaggaagcaatgtacctccaccgatcatggaattt
accgattatccttggcctaagtccatttcagctggtttttctagacaaggctatgataag
ccaactcctattcaagcacaaggatggcctattgccttggctggtcgagatatggttgga
attgcccaaactggtagtggaaagactatgtcttatatcatccctgcttttatacacatt
gactcacaattgaatgaacgtagagattatggtccaatggctttggttcttgctccaact
cgagagcttgctcagcagatccaagaagtagtcaatcattttcaaacccgattcggcaat
gtctgtgtatttggtggtgcttcaaaaggccctcaaatcaaagaaatcacacgcaacagg
ccaatgcttgtcatcgccactcctggtcgactcaatgactttatagaaagcggcattatt
agcctagccaatattagttatcttgttttagatgaagctgatcgtatgttagatatgggt
tttgaacctcaaattagaaagataattgctacaatcacaatggcaaaaaggcagactctc
atgtggtcagccacttggccaaaggaagtacgtactttggctgaagagtttctccaagat
tacattcaaattaatgttggtgctctccaactacatgctaaccacaatattactcaaatt
gttgaagtttgtggtgacatggagaagaaagaaaaacttttcagtcttcttactgaaata
gtaaaagagaatagtgaaaataaaatcatagtttttgctgagaccaagagaaaggttgat
gatttaacaaagcaattgagatactctaattggcctgccatgtgtattcatggtgacaag
agtcaatcggaaagggattgggttttgaaagagttcagaagtggaaaggctcctatttta
gttgctactgatgtagctgctcgaggacttgatgtcgaagacataaaatatgtcatcaac
tttgactatcccaactcaagtgaggattatgtccatcgtatcggacgaactggtcgtaaa
aacaaaaaaggaactgcatacactttctttaccaaaggcaattctaaacaagctaatgac
ttgatcaatgttcttaaagaagctaaccaaacagttaaccctaaactactcgaattatct
cgatttggtggtggaccagataagtaccgtcgatatggttcaagtagaaatggtttcatt
ccaaagaactcctacaattctggaagaggaggaggaggaaatggctataataactcttat
ggaaataattctaatggaaatggcgcaggctatcctcaaaagagaaaattcgattctttc
gatgctgcatctaactctaacgctaaaaaaccttattatgatagttcgtactcatctggg
tctcgtttcaattga
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