Tetranychus urticae (two-spotted spider mite): 107359221
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Entry
107359221 CDS
T04901
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107359221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tut03041
]
107359221
Enzymes [BR:
tut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107359221
Spliceosome [BR:
tut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107359221
Complex C
U4/U6.U5 tri-SnRNP related factors
107359221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_19
AAA_22
AAA_30
nSTAND3
Cas3-like_C_2
Flavi_DEAD
TsaE
T2SSE
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
107359221
NCBI-ProteinID:
XP_015781179
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MSSSKQTSSNHDEEERLKDIAERDAYAERLREKDQKRTRNVATKSDERMYAEAAKRLKLE
NEDRKAIVPKLREESRKNYLIKRKADQLVLLEGEIKDEEQIFSDVPLTKAEKAEYEYKKK
VLTLAKEHEQAKELESIRRYHIPEESKPSKVYEEIDEREKQPNAEARKWEEERLNTAKLS
FGAKNKSKKVEEYDILIDASIDFIKALTVGGQNTDEKDIVDEETAKRMTIAETRRSLPIY
AYKRELIKAVKEHQILIIEGETGSGKTTQIPQYLHEAGFTKGGKKVGCTQPRRVAAMSVA
ARVAQEMNVKLGHEVGYSIRFEDCTSERTVIKYMTDGMLLREFLSEPDLASYSCLIVDEA
HERTLHTDILFGLVKDIARFRPDFKLLISSATLDAEKFSVFFDEAPVFRIPGRRFPVDIY
YTSAPEADYIDACVVTILQIHITQPLGDILVFLPGQEEIEQCSEVLMERQRKLGSKIREL
IIRPIYANLPQELQAQVFEPTPPGARKVVIATNIAETSLTIDGIIYVIDPGYCKLNIYNP
RSRMESLVVQPVSKASANQRAGRAGRVAAGKCFRLFTAWAYQNELEDNTVPEIQRVHLGN
AVLLLKSLGINDIIHFDFLDPPPSETLVLALEQLYALGALNQFGELTRLGRKMAEFPIDP
MMSKALIASEKYNCSVEIMTICAMLSVNSNIFYRPKDKAIHADTARKNFFQPGGDHLMLL
NVYNQWVEMGYTKQWCAENFIQYRALVRARDIRDQLESLMDRAEVEIKSNPTEFVLIRKA
ILTGYFYHVARLGGGGGSYRTLKQHQPVSIHPNSSLFDEEPRWVLYHELVLTTKEYMRQV
IEIEPKWLVEIAPHFYKSEEVEDLCKKMPKKVGKAKEELERNY
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgagtaaacaaacttcatcaaatcatgatgaagaagaaagactcaaagatatt
gcagaaagagatgcttatgcagagagactcagagaaaaggaccaaaaaaggactcgtaat
gtggccaccaaatcagatgaaaggatgtacgctgaagcagcgaaaagactaaaactggaa
aatgaggatagaaaagctatagtaccaaaactgcgagaggaatcgagaaaaaactatcta
atcaaacgaaaggccgatcaattggttttgttagaaggggaaattaaggatgaagaacag
attttcagtgatgtacccttaactaaagctgaaaaggctgaatatgaatacaagaaaaag
gttcttactttggctaaggaacatgaacaggctaaagaattggaaagtattagaagatat
cacattccagaagaaagtaaaccaagcaaagtttatgaagaaatcgatgaaagggagaaa
caaccaaacgctgaagctagaaaatgggaagaagaaaggttaaatactgccaaattatca
ttcggagcaaaaaataaatccaaaaaggttgaagaatatgatattttaattgatgcttca
atcgacttcatcaaagcactaacggttggtggacaaaatactgacgaaaaagatatagtt
gacgaagaaacagcaaaaagaatgacaattgctgaaacaagaagatcattaccgatttat
gcttacaaaagagaactcatcaaagcagtaaaagagcatcaaattttaatcattgaagga
gagacaggatctggaaagacaacacaaattccccaatatttacatgaagcaggtttcacc
aaaggaggtaaaaaagttggttgcacacagccaagaagagtagctgctatgagcgtagcg
gcccgtgttgctcaagaaatgaatgttaaacttggccatgaagtcggttatagtattcgt
tttgaagattgtactagtgagcgaactgtgattaaatacatgactgatggtatgttactc
cgagaattcctctctgaacctgatttagcatcttattcatgcttgattgttgacgaagca
cacgagagaacccttcatacagacattttgtttggcttagttaaagatatagctcgattt
agacctgactttaagcttctcatctccagtgccactctggatgccgaaaaattcagcgtc
ttttttgatgaagctccagtttttcgtataccaggtcgtcggtttccagttgatatttat
tacacctcagcacctgaagctgattacatagatgcctgtgtagttactattttacaaata
cacatcacacaacctttaggtgatattctcgtctttcttcccggtcaagaggaaatcgaa
caatgttctgaagttttgatggaacgacaacgaaagttaggatcaaaaatcagggaactt
ataatcagaccaatttacgctaacttgcctcaagaattacaagctcaagttttcgaacca
actccaccgggtgctcggaaagttgtaattgctaccaacattgctgaaacttcattaaca
atagatggtattatttatgtcatcgatcctggttattgtaaattaaatatttataatccg
agatctcgtatggaatctttagttgtccaaccagtctctaaagctagtgctaatcaaaga
gccggtagagctggtcgtgttgctgccggtaaatgttttagactgttcactgcatgggca
tatcagaatgagcttgaggataatactgttcctgaaattcaaagggttcatcttggtaac
gccgttttacttttgaaaagtttaggaatcaatgacattattcattttgactttttggat
ccaccgccatctgaaacgcttgtacttgccttagaacaattatatgcattgggagctctt
aatcaatttggtgaacttactcgacttggtcgtaaaatggctgaatttcctattgaccca
atgatgtccaaagctttaattgcatccgaaaaatataactgtagtgttgagataatgacc
atttgcgccatgctcagtgttaattccaatattttttatcggccaaaagacaaagctatt
catgcagatacggcaaggaaaaacttttttcaacctggaggggatcatctgatgctgttg
aatgtttataatcaatgggttgaaatgggatatactaaacaatggtgtgctgaaaatttt
attcaatatcgagcgctagttagagctcgagatatacgagatcaactagaaagtctaatg
gatcgagccgaagtagaaattaaatcaaatccaactgaatttgtactcatccgtaaagcc
atcttaacaggttatttttatcatgttgcccgtttaggaggtggtggaggctcatatcgt
actttaaagcaacatcaacccgtttcaattcatcctaattcatcattgtttgatgaagaa
cctcgatgggttctctatcatgaactagttcttacaaccaaagagtacatgagacaggtt
attgaaattgaacctaaatggcttgtagaaattgctccacatttttataaatccgaagag
gttgaagatttatgtaagaaaatgccgaaaaaagtaggaaaagcaaaggaagaactggaa
cgaaattattga
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