Tetranychus urticae (two-spotted spider mite): 107359785
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Entry
107359785 CDS
T04901
Name
(RefSeq) polyadenylation and cleavage factor homolog 11-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107359785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tut03021
]
107359785
03019 Messenger RNA biogenesis [BR:
tut03019
]
107359785
Transcription machinery [BR:
tut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107359785
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
107359785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
zf_PCFS4
Pcf11_C
zf-rbx1
Pfc11_Clp1_ID
Motif
Other DBs
NCBI-GeneID:
107359785
NCBI-ProteinID:
XP_015781839
UniProt:
T1K1F6
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MSSFQEGLRDYENALKDLVFNSKPIISSLTMIAEDYLGVNNGPKKIAEVILERILTVDDT
QKLPVLYLIDSICKNIGKDYIESFEPDIVSIFKHVFEHSDETTRAALFKLRSTWKPVFSR
STLHAIDAAAQSIDPAWPVTNSPSQSNASTSKRRKENDSTSSTMVPSKRKASSNIAHSIN
ASSAPIAKRKPVIKQVPTTTSTVSKRKLASSESTSSSSKPVTSLGSHDRDYRKEFEPLIN
EVGKKLNDGVLSNKDRADIIQSINQVMKGSSSDLGGLSSLPVKKRAPGPVSTLPNVQAKD
PVQGQDQTLGPVNVPLQLPPAPIQSTSQISSLPIPAQASIPNQLQGATISSFVSSLDYHQ
PLPMKPLETIPPLCKDIGQQYVQVDGNTVKLFYLDENTSIVLMKGSLHLSLNELVKANPY
DLEPRMIMFEGKPTKVYIDSDKGSKEFVLLNFNSQPQTFFHGEHAQRIKLGGPCREIILN
GKPYQASFGGPPIEVKFVGDTHQTHTLRLSGPPPRVKISEDLRADLWSEYVKKITGQSDE
NPIPAVQTSYSSLPPATQTPYSQNILGTQSSSAVLLPPSTVQPASSLVPALTTQINPLAP
GLVTNSTVAISTPIPTALPIPVTVAMPLTAPCPTLPLPVTLPLQVPGPAVVPSLTNSVPV
TMTAPTTEPQVNLGDLFDKLISVGIIKKTEPQITDSNKLLATTITTTTATSTLPSSLTVT
AIGASPSVTSIVSATSSTNLATSVTRIGSPSSMNRENGLNQLDEIESEPLVLETKSLKAD
HPKVIADLINGTQCPNCSLRFEVGDSNERSKYSVHLDWHFRLNRQERTDSKSKSAAVRRW
FCSLDLWVSFKEISDETDQTMMDADKEEKESASEKKVCTVSANEDESLNECAVCKERFET
TWNEDEEEWQLLNAVKGQDEKIYHPLCLEDLLKQRSAENEASNLTATNGQEDKTEVKPEG
DDENETNQEDDSKEEIKMEVDDEVKHVDVVKKENILNNIDDDDDDIDDDYTLYPAETKGQ
IEVSVCCIS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctttcaagaaggtttgcgtgattatgaaaacgctctcaaagatttggtcttc
aattcgaaaccaatcatctctagtttaaccatgattgcggaagactatcttggtgtgaat
aatggaccaaagaagattgctgaggttatcttggaacgaattttaactgtcgatgatacc
caaaaacttccagttttatatttaatagattctatttgtaaaaacataggtaaagattat
attgaatctttcgagccagatattgtatctattttcaaacatgtatttgaacatagtgat
gaaaccacacgtgctgccttgttcaagctcaggagtacttggaagcctgttttttcaaga
agtactttgcatgctatagatgctgcagctcaaagcattgacccagcttggccagtaaca
aattcaccttcccaatccaatgcctctacatcaaaacgtcggaaagaaaatgattcaacg
tcttcaaccatggttccaagtaaacgtaaagctagtagcaatattgctcattcaatcaac
gcgtcatcagcaccaatagctaaacgcaagcctgtcatcaaacaagtcccaacaacaact
tcaacagtatctaagcgaaaattagcatcttccgaatcaacttcttcctcatctaaacca
gtcacatctctaggaagccatgatagagattatcgcaaagaatttgaaccattgatcaat
gaagtcggaaagaaattgaatgatggagttctcagtaacaaggatcgagctgatatcatc
caatcaataaaccaagtcatgaaaggaagttcatccgatcttggtggactttcttcccta
ccagtgaagaagcgagctcctggtccagtttcgactctgcctaatgttcaagccaaggat
ccagtccaaggccaggatcagactcttggacctgttaatgttccacttcagttaccgcca
gctcctatccaatctacaagtcaaatctctagccttcctattccagcccaggcttcaatt
ccaaatcaactacaaggagcgactatttctagtttcgtctcgtctttagattatcatcag
cctctacccatgaagccattggaaactattccccctttatgtaaagacattggccaacaa
tatgtccaagtggatggtaatacggtcaaattattctatttagatgaaaatacctctatt
gttttgatgaaagggtctcttcacttgtctttgaatgaattagtaaaagcaaatccctat
gatcttgaacctagaatgatcatgtttgagggcaagcctacgaaagtgtatattgatagt
gataaagggtcaaaagaatttgttttacttaattttaacagtcaaccacaaacatttttt
cacggtgaacacgctcagagaatcaaattaggcgggccttgtagagaaattattctcaat
ggtaaaccatatcaggcttcttttggtggaccgccgatagaagttaagtttgtcggggat
actcatcaaactcatactctcagattgagtggtccaccaccgcgggttaaaatatctgaa
gatctcagagctgatttatggtctgagtatgttaaaaaaattactggtcaatcagatgaa
aatccgataccagcagtacaaacatcttattcctccttacctccagcaacccaaactcct
tattctcaaaatattttaggtacacaatcttcttccgccgtcttactacctccatcaaca
gtacaaccagcatcgtctctggtaccagcattaacaacacagataaatccattagctcct
ggattggttacaaactcaactgtcgcaatttcaacgccaatacccacagctttacctatt
ccagtgactgtagcaatgccattgactgctccttgtccaactttaccattgcccgttaca
ttacctcttcaagttcctggaccagccgtcgtcccatctttaactaactctgttcctgta
acgatgacggctcctacaaccgaacctcaagttaatttaggagatttattcgataaactg
atttctgttggtatcattaagaagactgaacctcaaattacagattccaataaattgctt
gcaacaacaatcactactactacagcaacgagtactttaccatcatcattaacagttaca
gctattggtgcttctccttcagtcacatctatagtctcagcaacctcatcaacaaatttg
gcaacatctgttacaagaatagggtcaccttcatctatgaatcgagagaatggacttaat
caacttgatgagatagaaagtgaacctttagtattagagacaaaatctttgaaagcagat
caccctaaagttattgcagacttaataaatggaactcagtgtccaaattgttcattacgc
tttgaagttggtgattcaaacgaaagatctaaatattcagttcatcttgattggcatttt
aggttaaaccgacaagagcgaacagactctaaatcaaagtcagccgctgttcgccgttgg
ttttgttctctcgatttgtgggtttcctttaaagagatatcagatgaaactgatcagact
atgatggatgcagataaagaagagaaagaatcagcgagtgagaaaaaggtctgcacagtt
agcgcaaacgaagatgaaagtcttaatgagtgtgccgtctgtaaagaaaggttcgaaaca
acatggaacgaagatgaagaagagtggcaactattaaatgctgtgaaagggcaagacgaa
aaaatttatcatcccttatgtttagaagatctattgaaacaacgttcggctgaaaatgaa
gcatccaatttgactgcaaccaatgggcaagaagataagacagaagttaagcctgaagga
gacgacgaaaatgaaacaaatcaagaagatgatagcaaggaagaaataaagatggaggta
gatgacgaagtgaaacatgttgatgtagtaaagaaagaaaatattttgaataatattgat
gatgatgatgatgatatagatgatgattatactttgtatccagctgaaacaaaaggtcaa
atagaagtatccgtttgttgtatatcttag
DBGET
integrated database retrieval system
