Tetranychus urticae (two-spotted spider mite): 107360038
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Entry
107360038 CDS
T04901
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107360038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tut03021
]
107360038
03019 Messenger RNA biogenesis [BR:
tut03019
]
107360038
Transcription machinery [BR:
tut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107360038
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107360038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_RBM22
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-CCHC_2
Ribosomal_L18_c
zf-CCCH_9
HR1_TOCA
Motif
Other DBs
NCBI-GeneID:
107360038
NCBI-ProteinID:
XP_015782144
UniProt:
T1K2D6
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MEELLASVNDVEFDVEIALAEQIGALNLPFPGMDKSGAAVCVFHLRGNCHRGANCPFRHI
KGDRSIVCKHWLRGLCKKGDQCEFLHEYDLTKMPECYFYSRFHACSNKECPFLHIDPESK
IKDCPWYDRGFCRHGPNCRHRHTRRVICLCYLAGFCPLGPECKFVHPRFDLPINDPNVQA
KKGTVICHYCNELGHKIYNCPKMPPEAREEAIQSKLAQLEQQHSGQQPIQHPHHAPHNTH
HNSHHNSHHNPIHNQSHNNHPPHQNQGPPVPNATKNGTDNSNSNSSDPQGAQSKERIHRP
LDQVTCFKCGEKGHYANKCPKGHLAFLSSALKELQAKRGEGN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattattggcatccgtgaacgatgtcgaattcgacgttgaaatcgccttggct
gaacaaatcggtgctctcaatctacctttcccgggaatggacaaatctggtgcagcggtc
tgtgtttttcatcttcgtggtaactgtcatcgaggtgcaaattgtccattcagacatatc
aaaggagatcgtagtatagtttgtaaacactggcttcgtggtctatgtaaaaaaggagat
caatgtgaatttcttcatgaatatgatttaactaaaatgccggaatgctatttttattcc
cgtttccatgcatgttctaacaaggaatgcccttttctacacattgatccggaatctaaa
atcaaagattgtccgtggtatgatcgtggtttctgccggcatggacccaattgtcgccat
agacatactagacgtgtaatatgtttgtgttaccttgctggtttttgtcctctcggtcca
gaatgtaaatttgttcatcctagatttgatttacctatcaacgatccaaatgttcaagca
aagaaaggaactgtcatttgtcattattgcaatgaattaggccataaaatttataattgt
cccaagatgcctcctgaagcaagagaagaagcaatacaaagtaaacttgctcagcttgag
cagcaacactccggccaacaacctattcaacatccacatcatgctcctcataatacacat
cacaatagtcatcacaattcgcatcataatccgattcataatcaatcacataataatcac
cctcctcatcaaaatcaaggaccaccggttcctaatgcaactaaaaacggaacagataac
tccaactctaattcatcggatccccagggagctcaatccaaagaaaggattcataggcct
cttgatcaagtaacatgcttcaagtgtggagaaaaaggtcattatgctaataaatgccct
aaaggtcatcttgcatttctaagtagtgctcttaaagaacttcaagccaaacgcggcgaa
ggaaattaa
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integrated database retrieval system
