KEGG T04901: 107360416

Tetranychus urticae (two-spotted spider mite): 107360416

Entry

107360416         CDS       T04901

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB3

K03011

DNA-directed RNA polymerase II subunit RPB3

Organism

tut Tetranychus urticae (two-spotted spider mite)

Pathway

tut03020

RNA polymerase

tut03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:tut00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107360416
  09124 Replication and repair
   03420 Nucleotide excision repair
    107360416
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tut03021]
    107360416
   03400 DNA repair and recombination proteins [BR:tut03400]
    107360416
Transcription machinery [BR:tut03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     107360416
DNA repair and recombination proteins [BR:tut03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107360416

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_L GH141_M

Other DBs

NCBI-GeneID:

107360416

NCBI-ProteinID:

XP_015782558

UniProt:

T1JQ31

LinkDB

Position

Unknown

AA seq 273 aa
MPYANQPQISITDSSKENIKFSIEETSLSVANALRRTFISEVPTLAIDWVQLEANSTVLF
DEFIASRLGLIPLTSDEVVDKMAYSRDCVCSDFCQDCAVEFTLHVKCNEDATKNVTSSDL
KSKNQFVVPATKKADEEDYGDENEEILIVKLRKGQELRIRAYAKKGFGKEHAKWNPTSSV
SFEYDPDNSFRHTTFPIPEEWPKSEFSELDDTKYEADYIRDKQPSKFYFNLESSGALKPV
NIVLSGLNVLKKKLTDLQTQLNHEIEHDALTIM

NT seq 822 nt +upstreamnt +downstreamnt
atgccatatgctaatcaaccacaaatcagtattactgattcttccaaggaaaatattaaa
ttctctattgaagaaacaagtttaagtgtcgccaatgctttacgccggacatttattagt
gaggtaccaactttggccattgattgggttcaattggaggcaaattctaccgttttgttt
gatgaatttattgcttctcgtttgggacttattcctctaaccagtgatgaggttgtcgat
aaaatggcttattcgagagactgtgtctgtagtgacttctgtcaggattgtgctgtcgaa
ttcacattgcatgttaaatgcaatgaggatgccactaaaaatgtaacttcatccgacttg
aaaagtaaaaatcaatttgttgtacctgctaccaaaaaagctgatgaagaggattatggt
gatgagaatgaagaaatattaatcgtcaagctcaggaaaggacaagaattgagaatacgt
gcttatgctaagaaaggctttggcaaggaacatgctaaatggaatcctacttctagtgta
tcctttgaatatgatccagataattcgtttaggcacacaacttttccaattcccgaagaa
tggcctaaaagtgaattttctgaattggatgatactaaatacgaagctgattatatcaga
gacaagcaaccatcaaaattctacttcaacctcgaatcttccggagctttgaagccggtc
aatattgtgctaagtggattgaacgttttgaaaaagaagctcacagatttgcaaacccaa
ttgaatcacgaaattgaacacgatgctctaacaatcatgtaa

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