Tetranychus urticae (two-spotted spider mite): 107361243
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Entry
107361243 CDS
T04901
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut04140
Autophagy - animal
tut04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107361243
04148 Efferocytosis
107361243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tut04131
]
107361243
Membrane trafficking [BR:
tut04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
107361243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
DUF5830
FYVE_2
Lgl_C
Motif
Other DBs
NCBI-GeneID:
107361243
NCBI-ProteinID:
XP_015783506
UniProt:
T1K7G6
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MLEIYRVAPILKNYPLDIECMHAYGDHLLVGTKQGNLLLFKLVLKPTKELKFDVQLLRSN
KAFTKKPIIQVAGVPEFHLIISLYDNLINVHDLDKVVSPLISCLQKTKGATLFVINVQKL
QTLTGDIQYTLRLCVVVKRKLMFFYWKNDKFLELAPDINVPDTPKVIAWCSESLCVGFRN
EYCMISVSGNKTELFPLGKYPEPIVTSLEGDRFAVGIDEKTFFLDQVAKPILKCPVTWSD
CPIAMVEDSPYLIALLPNNMMEIRTADPRLLIQKIDELASTTTGKLKHLFKCGDKKGFLF
VCSNKDLYCLVARPIDQQTSQLIQSKEFDLAKQLVYMSPDFDSDASESVKRKEMIISQIE
NLQAFDYFCKKEFVKAMDLFLKLETHPSLVIGFFPGFLPEDFRNELEYPHEPPVFKGADF
EAGIFALIDYLLEFKKKLQKLNEDTENSPPGYNTNKPINHPISSNISESSTNSSPSFKQY
LKSRDKLLEIVDTTLLKCYLQTNDALVSSLVRLPDNHCHLQESETWLKKYHKYGDLIIFY
QTRGLHRKALDLLFAQAKQPNSSLPGHERTIQYLQHLGETSLNLIFEYSEWVLKDHPTDG
LRIFTEDTAETEALPREAVLEYLQKICPDLIIPYLEHIISIWKDKTAMFHNILANKYREK
VKALREEYLVSLPEGQLPLPAGQEPGDLGDTRRKLLTFLETSNNYSTETLSIFLLNDELW
EERAIVSGKMGNHKDALAIYAQYLHDYEKAEQYCIKTYNKDNPNNKDVFLILLKLYVTQP
SEANSINSAVAWHYEMTADIYQQNLNEALRLLKAHAIKIDPIRALDILPSIIYISSIRTF
LETATINLIKERHDGLMYRNLLLTQHLAVQQARLKLHQEYKIIVEDSDRCKECQKRIGTS
AFLRYPNGDLVHYSCKDRRVIW
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaatctatcgagtagctcctattcttaaaaattatcctttggacattgaatgt
atgcatgcttatggagatcatctacttgttggaaccaaacagggtaaccttttattgttt
aaactggtccttaaaccaaccaaagagctcaagtttgatgtgcaactattgcgatccaac
aaggcctttacaaaaaaaccgatcatccaagttgctggtgttcccgaatttcatttgatt
atcagcctttatgacaatctcatcaatgttcatgatctagataaagtcgtttcaccatta
atatcatgcttgcaaaagaccaaaggagccaccctctttgttataaatgtacaaaaactt
caaacattaactggagacattcaatacacattaagattgtgcgttgtcgtcaaaagaaaa
ctcatgtttttctattggaaaaacgacaaatttttagagctagctccagatataaacgtt
cctgatacacccaaagtaattgcttggtgctctgaatcactttgtgttggttttcgcaat
gaatactgtatgatatcagtttcaggaaataaaacagaactttttcctctcggaaaatac
ccggaaccaattgtgacatctctagagggtgatcgatttgctgttggaattgatgagaaa
acattctttctggatcaagttgctaaacctatcctcaaatgtccagtaacctggtctgat
tgtcccattgcaatggttgaagattcaccctatttaattgctcttttaccaaacaacatg
atggaaatacgcacagctgatcctcgactattgattcaaaaaattgatgaacttgccagt
accacaactggaaagctaaagcacctttttaaatgtggagacaagaaaggattcttgttt
gtctgctcaaataaagatttatattgtctagttgctcgtccaattgaccagcaaacttct
caattgattcaaagtaaagagtttgacttggctaaacaattggtgtacatgtccccagat
tttgattctgatgcatcagaatcagtgaaacgcaaagagatgataatttctcaaattgaa
aatctccaagcttttgattatttttgtaaaaaggaattcgttaaagctatggatctattt
ctcaaattggaaactcatccatcccttgtaattggtttcttccctggttttctcccggag
gattttcgtaatgagctcgagtatccacatgagcctcctgttttcaaaggagctgacttt
gaagcaggcatatttgccttgattgattatcttctcgagttcaagaaaaaacttcaaaag
ctcaacgaagacactgaaaattctccaccaggctataacaccaacaaacccataaatcat
ccaatctcttcaaatatctctgaatcatcaacaaattcgtcaccatctttcaagcaatat
ctcaaatctcgtgacaaattattggaaattgtggacacaactttacttaagtgttactta
caaactaatgatgctctagtctcttcattggttcgcctaccagacaaccattgtcatcta
caagaaagtgaaacatggttgaaaaaataccacaaatatggtgatttgattattttttat
caaactcgtggactccaccgtaaagccttagatttactttttgctcaagccaaacagcca
aactcatcattgcctggccatgaaagaacaattcaatatcttcaacatttgggagagaca
agtttaaatttaatctttgaatattctgaatgggtacttaaagatcatcccactgatgga
ttacgtatatttactgaagatactgctgaaacagaggctcttccccgtgaagctgttctt
gaatatttacaaaaaatttgtcctgatcttattatcccatatcttgagcatatcatttca
atttggaaagataaaactgcaatgtttcacaacattttagccaataaataccgtgaaaaa
gtgaaagctttaagagaggaatacttggtatctttacctgaagggcaacttcccttacct
gccggacaagaacccggagatcttggagatactaggagaaaattgttaacctttttggaa
acatcaaacaattattccactgaaaccttgtccatttttttgcttaacgatgaactttgg
gaagaaagagcaatagtttcgggtaaaatgggtaatcataaagacgctttggcaatttac
gctcaataccttcatgactacgaaaaggctgaacaatattgcattaaaacttacaacaaa
gacaatcccaataataaagatgttttcctgattctattgaagttatatgttactcaaccg
tccgaagcaaattcaattaactcagccgttgcatggcactatgaaatgacggctgacatt
tatcaacaaaatttgaatgaagccttgcgcctattgaaagctcacgcaatcaaaattgat
ccaattcgtgctttagacattttaccttcaatcatttatatctcatcgatccgaaccttc
ctggaaactgctactataaacctaatcaaagaacgtcatgatggccttatgtatcgaaat
ttactgttaactcaacacttggccgtccaacaagctcgtctcaagcttcaccaagagtac
aaaattatagtcgaagattcagatcgttgtaaagagtgtcaaaaacgcattggaaccagt
gccttcctacgttatcctaatggtgatcttgtacattactcgtgtaaagatcgacgagta
atttggtaa
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