Tetranychus urticae (two-spotted spider mite): 107361736
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Entry
107361736 CDS
T04901
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03020
RNA polymerase
tut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107361736
09124 Replication and repair
03420 Nucleotide excision repair
107361736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tut03021
]
107361736
03400 DNA repair and recombination proteins [BR:
tut03400
]
107361736
Enzymes [BR:
tut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107361736
Transcription machinery [BR:
tut03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107361736
DNA repair and recombination proteins [BR:
tut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107361736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Peptidase_C24
DUF5817
Motif
Other DBs
NCBI-GeneID:
107361736
NCBI-ProteinID:
XP_015784094
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MMDDEGDLFGEEDNAEIAPDLWQEACWVVISSYFDEKGLVRQQLDSFDEFIDMSVQKIVE
DSALIELQAEAQHTSGEVENPPRYVLKFEQLYLSKPTHWEKDGAPAPMLPNEARLRNLTY
AAPLYVDVTKTVIKEGQEPVETQHQKTFIGKIPVMLRSKSCYLYGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNSVYVFSMKDSKYAYKAECRSCIEHSSRPTSTLWVNML
SRGSHGTKKTAIGQRIIAIIPYIKQEIPIMIVFRALGFVADRDILEHIVYDFEDPEIMEM
VKPSLDEAFVVQEQNVALNFIGVRGARPGVTKEKRIKYAKEILQKEMLPHVGISDYCETK
KAYYLGYMVHRLLVAALGRRELDDRDHYGNKRLDLAGPLMAYLFRGLFRNLTKEVRMYAQ
KFIDSGKDFNLDLAIKTRIISDGLRYSLATGNWGDQKKAHTARAGVSQVLNRLTYASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSNPSP
ILEFLEEWSMENLEETAPSTIADATKIFVNGCWVGIHREPDLLMATLRKLRRQMDIVVSE
VSMVRDIRDREIRIFTDAGRICRPLLIVENQKLLLKKSHIDMLKEREYNNYSWGDLVGSG
VVEYIDTSEEETVMIAMTPDDLQDTEMAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIMSYTGYNQEDSVILNSSAIDRGFFRSVFYRSYKDAELKRIGDQEEQFERPSRDTCQNM
RNAIYDKLEDDGIIAPGSRVSGDDVIIGKTVLLPENEDELEATTKKFVKRDASTFLRNSE
TGIVDQVMITINNDGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIPYRQEDMPFTSEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDTVNVQKISELLAEYGY
HLRGYEVMYNGHTGRKVNAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRAR
DGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRVHVCNLCGLICIANLRNNTFECKGC
RNKTQISQVRLPYACKLLFQELMSMSIAPRIVV
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgagggtgatctgtttggtgaagaggataatgccgagattgcaccagat
ctttggcaagaagcttgctgggtcgtaattagttcttattttgatgaaaaaggtttagtt
cgacaacaattggactcttttgatgaatttattgatatgtccgtacaaaaaattgttgaa
gactctgctctcattgaattacaggctgaagctcagcatacttctggtgaagtcgaaaat
ccaccaagatatgttttaaaatttgaacaactctatctttccaaacctacacattgggaa
aaagatggtgcaccggctcctatgttacccaatgaagctagactacgtaatttaacttat
gcagctcctctttacgttgatgtcactaaaacggtaattaaagaaggccaagagccagtc
gaaactcaacatcagaaaacttttattggtaaaattccagtcatgttaagatccaaaagt
tgttacctatatggtttgactgatcgtgatttaactgaattaaatgaatgcccacttgac
cctggtggatacttcatcatcaacggatctgaaaaagtattgattgcccaagaaaagatg
gcaactaattctgtctacgttttcagtatgaaagattctaaatacgcttacaaagcagaa
tgtcgttcttgtatcgagcattcatctcgtccaacaagtactttatgggtcaatatgctt
tcaagaggtagccatggtactaaaaaaactgctatcggacaacgtataatagctattatt
ccatatattaaacaagaaattcccatcatgattgtattcagagctttaggttttgttgcc
gatagagatatcttggaacatattgtttacgatttcgaggatcctgaaatcatggaaatg
gttaaaccatccttagacgaagcctttgtggtccaagaacaaaacgttgctttaaacttt
atcggtgttcgtggtgcaagaccaggtgttacgaaagaaaaaagaataaagtatgccaaa
gaaattttacagaaagaaatgttaccacatgtgggtattagtgattattgtgagaccaag
aaagcatattatctcggatatatggtccatcgtcttttagtcgcagctttaggtcgtcga
gagttggatgacagagatcattacggcaacaaaagacttgatttagctggtcctttaatg
gcctacctatttcgtggactcttcagaaacttgacgaaagaagtacggatgtatgctcaa
aaattcattgacagtggaaaagatttcaatttagaccttgccatcaaaactagaattata
tctgatggattacgatattctcttgctactggaaattggggagatcaaaagaaagctcac
acagctcgagctggtgtctcacaagtgttaaatagactcacatatgcctcaactttatct
catcttagacgtgtaaactctcctattggtcgtgatggtaaattggctaaacctcgtcag
cttcataatactttgtggggtatgatttgtcccgccgaaactcctgaaggccatgctgta
ggtttggtcaaaaatttagctctcatggcttacatctcagttggttcgaatccatctcct
attctggagttcttggaagaatggagtatggaaaacttggaggaaacagctccttcaact
attgccgatgcaactaaaatttttgtcaatggatgttgggttggtattcatcgagaacct
gatttactcatggctactttaagaaaactacgtcgtcaaatggatatcgttgtatctgaa
gtatcaatggttcgtgatattcgtgacagagaaattcgaatctttaccgatgcaggtcgt
atttgtcgaccactattgatcgtggaaaatcagaaactgttacttaaaaagtcacatatc
gatatgttgaaagaaagagaatataacaattacagttggggtgatttagttggtagcggt
gtcgttgaatacattgacacttcagaagaagaaaccgtcatgattgcaatgacacctgat
gatttgcaagatactgaaatggcttattgttcaacttatactcactgtgaaattcatccg
tccatgatattaggtgtttgtgcatctattatccccttccctgatcacaatcaatcacct
cgtaatacctaccaatctgctatgggtaaacaagccatgggtgtttatattaccaatttt
catgttcgcatggatactctggctcacgtcctttattatccccaaaagccattggttaca
actcgatctatggaatatttacgtttcagagaattaccagctggtatcaattcaattgtt
gccattatgtcttacacgggatacaatcaagaagattctgtcattttaaattcatctgct
atagatcgaggtttcttcagatctgtcttctatcgatcttataaagatgctgagctcaaa
aggattggagaccaagaagaacaatttgaaagacctagtcgagatacttgtcaaaatatg
cgtaatgcaatttacgacaaacttgaggacgacggtattattgctcctggtagtagagtg
tctggtgatgatgttatcatcggtaaaacagttttattgcctgagaacgaagatgaactc
gaagcaacaaccaaaaaattcgttaaacgtgatgcttcaaccttccttagaaacagtgaa
actggtatagttgaccaagtaatgatcaccatcaacaatgatggttataaattttgtaaa
ataagagtaagatcagttagaataccgcaaattggtgacaaatttgcatctcgtcatgga
cagaaaggtacttgtggtataccatacagacaagaagatatgccatttacaagtgaaggt
atcacacctgatattatcattaatccacacgccattccatctcgtatgaccattggtcat
ttaatcgaatgtcttcaaggaaaagtttccgcaaacaaaggagaaattggtgatgctact
cctttcaacgatactgtaaacgttcaaaaaatttccgagcttcttgctgaatatggttac
cacttaagaggttatgaagtaatgtataatggacacactggacgtaaagtaaatgctcaa
atctttttaggacccacttattatcaacgtcttaaacacatggtagatgacaagattcac
tctagagcccgtggtcctgtgcaaatcttggttagacaacctatggaaggtcgagctaga
gatggaggtttacgtttcggtgaaatggaacgtgattgtcaaattgctcacggagctgct
caattcttgagggaaagacttttcgaagtttctgatccttatagagttcatgtttgtaat
ttatgtggacttatttgtattgccaatttacgaaacaatacctttgaatgtaaaggctgt
cgaaataagacacagatatcacaagttcgtctcccttatgcttgtaaactattattccaa
gaattaatgtccatgtccatcgctcctcgtatcgttgtttaa
DBGET
integrated database retrieval system
