Tetranychus urticae (two-spotted spider mite): 107361776
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Entry
107361776 CDS
T04901
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tut03036
]
107361776
Chromosome and associated proteins [BR:
tut03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107361776
microRNA pathway
RISC loading complex
107361776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
ResIII
Helicase_C
Dicer_dimer
PAZ
SLFN-g3_helicase
Dicer_platform
Dicer_dsRBD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107361776
NCBI-ProteinID:
XP_015784164
UniProt:
T1K8D9
LinkDB
All DBs
Position
Unknown
AA seq
1668 aa
AA seq
DB search
MVKTRKRVVDKIPRPYQLEALDKALSNNTILCLPTGSGKTFIATIVLKEHAGELNLPYNE
NGKRAFFLVPNQVLVQQQAKAIENDTTFNVGRFSGTSKDKDGTGIDDWTKAYWDLIFMKY
QVLVMTRKIFFDIIASGHIKTSSIAVIIFDEAHHGAPNAKGKNTNHDYVRIMEILKEKGH
SNIRIIGLTASLINNRWVDENKLESMIKEIGNTYCADVFSPETSKISNANEIIWTFKVPE
GWDAEFPDAVKSYLSKMSSLIGSISGMKKNQSIHHEDLSMVEEMLGNAANPIPLDLIKNT
FTDLEHIFSTFGPWATHRTVAFVLESYERELELINHLENSYNEIIQHVISLLKNLEKSLR
ENLVRMSKRDALLAGIPNKMLRLLQFLYEFNRKKDSDPISAIIFVERRLDAYVLSSWLSN
IAQFVSGFDFIKCDFTVGFSSYNPFPFNSQFRKKQETVITRFREKTLNILVSTSVLEEGL
DINHCNCIVRYDKPTNYRAYVQSKGRARSNGAYFIFFAKEAEIDATERDIEKFRDTERKL
RFLSKPCQAEDSQVKNSFEMLQTSAGGILPLYEAKTRVIFYCDHLPADGYTVKMPKKDIS
IHRNAATNFQLFKCKLTLPKISPYHKLPIFGRKCSTAAEAEASAYFEAAKELWAHQELDD
SFRPLDRKTLIARLMKKYNLDIDRTEMKEWEEQKAAIKRSNQRKKRKERIALPPKPGTKK
KRRQYPIIFSDKLKGYQSMDSPCWLYKVSAKNEKQEETSRLGLISFYPLPLEEIEGKMLI
YSSKENLTISLELIENFVLKEQQLENIRHFQEFIFSGCLKIGVRDESKESSIFFTAAVSA
YHLLYIFLTDDKNIDYQLLKQTYHRRPIQPSDYSSLTGALISKNYGVNQRGLLVVKEVDF
TLSPKSPFVNESYATFEDYYKTRYGIKSLKSDQPLLCCHAAPTKTFFPCQPDRKAMKLAN
SPQIVHLVPELCSYEYFSYEYLDIIYTIPAISSVINQYLNASAIRRRLCSEIGYGIAEIP
VDEKYNWDQRYKFTNFPEMKVKIAEYTKPKESIDLSCVIVDHISPSNGGNMETQDVSHPE
DTDDSDSEDSDDSEEDDDDSSSETAEDDEDETSMNTSEDTYNTVYQNLPVVIKRANDSSL
FNELTPVAQPSIAKVSWNGNNVKLNHNLLQDYEKKLKTFNLRSWKSSQNGSNGVDFNELD
SDNDSAKETNHYVSTTPIYTDKLSLFKYGLPIELIVEAFTTKKADSKINLERLEIIGDSF
LKYIVSALLFLQLNDLNEARITYLKMTLVSNFYLLHLGRSKGLAQYINDKTFLPRLNWLP
PFYSSANRNFTEQEISDKSVADMMEALLGAHLICLGEKAAISFLSWIGMPLFTSFNFDSL
MNDNSYLPSYHDTVPIENPAEIQAAWRCGNLSKLEQKLGYTFKRKDLLIEALTHPSWSRS
HFNSYQRLEFLGDAILDYLITSYIFDNQKYQHLKPGEVTIIRQALVNNDYFATISLVNGF
DKFIFHLSPTLYKEINTFREQLTKADLFGENKIKLGSFLLDNLEMETLTEPPKALGDIFE
SIAGAIYLDSGNSLSTVWHIYCKFFCNELEFFCANVPKSPILRLFEAFPFAKFVSEKLPN
KESKRKRLNLIVDGWSFKVDETKLLEDAMNKRTEKHYLVLSALNKLAK
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaactcgtaaaagggttgtagataaaattcctcgtccttaccaactagaggct
cttgacaaagctctaagcaataatacaattctttgcctaccgactggatcaggtaaaact
tttattgccactattgtgctaaaggagcacgccggagaattgaaccttccatataatgag
aatggtaaaagagccttcttcttggtgccaaatcaagttctcgtgcaacaacaggcgaaa
gctatcgaaaatgatactacttttaatgttggtcggttttctggtacaagcaaagacaag
gatggtactggtatcgatgattggactaaagcttactgggatttgatttttatgaaatat
caagttttagttatgacacggaaaattttctttgacatcatcgcttcggggcacattaaa
acatcttcgatagctgttattatctttgatgaagcgcatcatggggcacccaatgctaaa
ggaaaaaataccaatcacgactacgtccggataatggaaatactcaaggagaaaggccat
tctaatatcagaattattggactgaccgcaagtttaattaataatcgttgggttgatgaa
aacaaattggaatcaatgataaaagagatcggcaacacttactgtgctgatgtattttcc
cctgaaacatcaaagataagtaatgcgaatgagataatctggacattcaaagttcctgaa
ggctgggatgctgaatttccagatgctgtaaaatcttacctatcaaaaatgagttcgctg
attggatctatcagcggaatgaaaaagaatcaatccatccatcatgaggatttgtcaatg
gttgaggaaatgttgggaaatgcagctaatccgattcctttggatctcattaagaatact
ttcacagatttggaacatattttttcgacctttgggccatgggcaactcaccgaacagtc
gcatttgttcttgagagctatgaacgtgagcttgaactgattaatcatttggaaaattct
tacaatgaaattattcaacatgttatttcattgcttaaaaatcttgagaaaagtctcagg
gaaaatcttgtccggatgtctaaacgagatgctctattagctggaataccgaataagatg
ctccgtctccttcaatttttgtatgagttcaatagaaagaaagacagtgacccgatttct
gccattatattcgttgaacgtcgcttagatgcttatgtcctctcatcttggctctccaac
atcgcacagtttgtttcaggatttgatttcataaaatgtgatttcactgttggtttttca
tcgtacaatccttttcctttcaattcccaattcagaaaaaaacaagaaactgttattacc
agattcagagaaaagaccctcaacatcctcgtttcgacttctgtattggaagaagggttg
gacataaaccattgtaattgtattgtcagatacgataaacctactaactatcgtgcatat
gttcaaagtaaaggacgagctcgcagtaatggagcttatttcatctttttcgctaaagaa
gccgagatagatgcaactgaaagggatattgaaaagtttcgtgatactgaaagaaagctg
cgttttctctctaaaccttgtcaagcagaagattctcaagttaaaaactcatttgaaatg
ttgcaaacgagtgctggcggtattttgcctctctacgaggcaaaaaccagagtgattttt
tattgtgaccatctacctgcagacggatacactgtcaaaatgcctaagaaagatatttct
attcaccgaaatgctgcaacaaattttcaattattcaaatgtaagctcactttaccgaaa
atctcaccctatcataagttgccgattttcgggagaaaatgttcaactgcagctgaagca
gaggcgtctgcctattttgaagcagccaaagaactttgggctcatcaagaattggatgat
agctttcgtccgttggatcggaagactttgattgcaagattgatgaaaaaatataatctg
gatattgatcgaacagaaatgaaagaatgggaagagcaaaaggctgctatcaaaagatcc
aatcaaagaaaaaagaggaaagaaagaatcgcgttaccacctaaacctggtacaaaaaag
aagcgtcgtcaatatccaatcatcttttcggataagttaaaaggttaccagtctatggac
tcgccctgctggttatacaaagtctctgcgaaaaatgaaaaacaggaggaaactagtcgc
cttggtttgatttctttctatcccttaccattggaagaaatcgaaggcaaaatgctcatt
tattcgtctaaggaaaatttgactatttcattggagttgatagaaaattttgttttgaaa
gagcagcagcttgaaaacatcagacactttcaagagtttattttctctggttgtttaaaa
attggtgtccgtgacgaatctaaagaatcttcaatttttttcactgcagctgtatctgct
tatcatttgttatacattttcctaaccgatgataaaaatattgactatcaattgttgaaa
caaacataccaccgtcgcccgatccagccctctgattattcatcgctgaccggtgcattg
atcagtaaaaattatggtgttaatcaaagaggacttctcgttgttaaagaagttgacttt
acattgtcacctaaatctccttttgtgaacgaaagttacgccacttttgaagattattac
aaaacgcgttatggaataaaatcgttaaagagtgatcaacctcttctttgctgccatgcc
gctcccacaaaaacattttttccttgtcaaccagatcgaaaggctatgaaacttgctaat
tctccgcaaattgtacacttggttcctgaactttgctcttatgaatacttttcctatgaa
tatttggatataatctacacgattccagcaatatcttcagtaatcaatcaatatttgaac
gcctctgctattcgcagaagactttgttcagaaattggttatggaatagctgaaatacca
gtcgatgagaaatacaactgggatcaacggtacaaatttacaaacttccctgaaatgaaa
gttaaaattgctgaatacaccaagccaaaggaatcaattgacttatcatgtgtcattgtt
gatcatatttcgccttctaatggtgggaatatggaaactcaggacgtgagtcacccggaa
gacacagatgatagtgatagtgaggatagtgacgacagtgaggaagacgatgacgatagc
tctagtgaaacagcagaagatgatgaagatgaaacatcaatgaatacttcagaggatact
tacaatactgtttatcaaaatcttcccgtcgttataaaacgtgccaatgattctagttta
tttaatgaattaactccggtagctcaacctagcattgcaaaagtttcatggaatggtaat
aatgtcaaacttaatcataatctgttacaagattatgagaaaaagctgaaaacatttaat
ttaagatcttggaaaagctctcaaaatggaagcaacggtgttgattttaacgaactagat
tctgacaatgactctgctaaagaaactaatcattatgtttcaacaactccaatctatacg
gataaattatccctctttaaatatggcctgccaattgagctgattgtggaagctttcacc
acgaaaaaagctgactctaaaatcaaccttgaacgattggaaatcattggtgattctttc
ttgaaatacatcgtttctgcccttttattcctacaactgaatgatttaaatgaagcaaga
atcacttatctcaaaatgacgcttgtttcaaacttttatttgttgcatttgggtcgatct
aaaggcttggctcaatatataaatgacaaaacctttcttccgaggttgaactggttaccg
ccattttattcatccgcaaatcgtaattttaccgagcaagaaattagcgataaaagtgtt
gctgatatgatggaagctttgttgggtgctcatttgatctgtcttggcgaaaaagcagca
atctcgtttttatcttggattggaatgcctttatttacatcattcaattttgattcatta
atgaatgacaactcatatttgccatcctatcacgatactgtcccgatcgagaatccagca
gaaattcaagcggcctggagatgtggcaacctatcaaaacttgagcagaaacttggatac
acatttaaacgcaaagatcttttgattgaggctctaacacatccatcctggagtcgatca
cattttaacagttatcaaaggcttgaatttttgggtgatgctatacttgattatttaatc
acttcttacatttttgataatcaaaaatatcagcatttaaagcccggagaagttacaatc
attcgtcaagcgcttgttaacaatgactactttgcaactatttcattagttaatggattt
gataaattcatctttcacctctctcctactttgtacaaagaaatcaacactttcagagag
caattaactaaagcggatctttttggtgaaaacaagatcaaacttggcagctttcttctt
gataatcttgagatggaaacattgaccgaaccgcccaaagcattgggagatatttttgaa
tcaattgctggtgcaatatatttggacagtggcaattctttatctactgtttggcatatt
tattgtaaatttttttgcaacgagcttgaatttttctgtgctaatgttcctaaaagtcca
attcttcgcttatttgaggcttttccatttgcaaaatttgtatcagaaaaactgccaaac
aaagaatcaaaaaggaaaagactcaacttaattgtcgatggatggagcttcaaagtcgat
gagactaaattattggaagacgcaatgaataaacggactgaaaaacattatctggttctc
agtgccttgaataaactggccaaatag
DBGET
integrated database retrieval system
