Tetranychus urticae (two-spotted spider mite): 107362016
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Entry
107362016 CDS
T04901
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107362016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107362016
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107362016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
107362016
NCBI-ProteinID:
XP_015784483
UniProt:
T1K8U1
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MSERGQKAEARLQENPWDTEAWQILIKEYGAKKLEEARPFYERLVTQFPLTGRYWKLYID
HEMKSRNYDKVEKLFQRCLIKVLHIDLWRCYLNYIKETKAPHPSFREKMAQAYDFALDKI
GIDNHSYPIWNDYVSFLKNVEAVGSYAENQKITAVRRVYQRGVINPMMNIDQFWRDYIAY
EQSINQMIAEKMIADRSRDYMNARRVAKEYEAITRGLNRNAPSLPPSCRPEDLKQVDIWR
KYIAWEKSNPLRSEDPGLVIKRVVFAYETCLLCLGHYPDIWYEYAAYLEENSKMMSDKGD
MNQFKSLQEDSSAVYERAISTLLKTSLLIHFAYADFEEGRNNKNKAVEIYNRLLDIKDDK
LDPTLVYIQFMKFSRRSEGIKAARNVFKRAREDPRCGHQVFTCAALMEYYCSKDKNVACK
IFELGLKRYGNNANYISSYIDFLSAQNEENNARVLFERVLTSNALDPADSLQIWNRFLTF
ESNIGDLSSVIKVEKRRAIIIQEITKVSSETAYLVDRYKFQDLMPCSTHELKSIGYQFKS
SLPNGLSQTLGNLLGPAAAAAASINNVPAPVNSNSPTNNIEPSSSNQVTPDLNQMIPYKP
VLTSVLIPGSHSVPGGIFPPPPAVGQLLAQLPHPSSFHGPFVIVDELMNLIRNTNKIDIS
IEKPNYKPDQNNHHNIKLFETAIQASKTFNPIMSNSSQEKGGGGGGSGSGGPGGPGGMKR
IIGHDDDEEDPENDNSNPANPPAFDIYRTRQLQKRVK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaagaggacaaaaggccgaagctcggctccaggaaaatccatgggataccgaa
gcctggcagattttaataaaggagtatggagccaagaagcttgaagaagctcgtcctttc
tatgaaagactggttacacaattccctctgaccggcagatattggaaattgtatattgat
catgaaatgaaatctcgcaactatgataaagtggaaaaattatttcaaaggtgtttaatt
aaagttcttcacattgatttgtggagatgttacctaaattatattaaagaaacaaaagca
cctcatccatcatttcgggaaaaaatggctcaagcgtatgattttgctttagataagatt
ggtattgacaatcattcgtacccaatttggaatgattatgtctccttcctgaaaaatgtg
gaagctgttggcagttatgcggaaaatcaaaaaataactgcggttcgtagagtataccag
cgaggagtaataaatccaatgatgaacattgatcaattctggcgtgattatatagcatat
gagcaaagtattaaccaaatgattgcagaaaaaatgatagcggatcgcagtagagattac
atgaatgcccgtcgtgtagccaaggaatatgaagctattactcgaggtcttaatcgtaat
gcgccctcactaccaccctcttgtcgacctgaagatttaaaacaagttgatatctggcgc
aaatacatagcttgggaaaagagtaatcccctaaggagtgaagatccaggtctagtgatc
aaaagagttgtctttgcttatgaaacatgtcttctgtgtttaggtcattatcccgatatt
tggtatgaatatgctgcttatcttgaagaaaattctaaaatgatgagtgacaaaggagat
atgaaccaatttaaaagtttacaagaagattcttcggctgtttatgagagagctatctca
accctgctcaagacaagtttgttgattcattttgcttatgctgattttgaagaaggtcgt
aataataaaaataaagctgttgaaatttataatagacttttagatataaaagatgataaa
cttgatcctaccctagtctatatacaatttatgaaattttcacgtcggtccgaaggaata
aaagcggcgagaaatgtttttaaaagagcccgtgaagatcctcgatgtggacatcaggta
ttcacttgtgctgctctaatggagtattactgttcgaaagacaagaatgttgcttgtaaa
atatttgagttgggccttaaacggtatgggaacaatgctaattacatatcatcgtacatt
gatttcctttcagcacagaacgaggagaacaatgctcgtgtcctttttgaacgtgtcctc
acctcgaatgctcttgatccagctgactctttacaaatatggaatcgttttttaacattt
gaatcaaatattggtgatctttcttctgtaattaaagtagaaaaaagaagagccattatt
attcaagagatcacaaaagtttcatccgagacagcgtatcttgttgatagatataaattt
caagacctgatgccttgctcaacacacgaattaaaatcaattggttatcaatttaaatca
tcgcttcctaatggactgtcacaaacactgggtaatttgcttggacccgctgctgctgct
gctgcctcaattaataatgtaccagctcctgttaactcaaattcacctacaaataacatt
gagcctagctcatcaaatcaagtcacccctgatcttaatcagatgataccctataagcca
gttctaacatccgttttaattcctgggtcacattcagttcctggaggaatatttccacca
ccaccagctgttggccaattgctagcccaattaccgcaccctagctctttccatggaccc
ttcgtcattgttgatgagttgatgaaccttattcgcaacacaaacaagattgacatttct
attgaaaaacctaattacaaaccagaccaaaataatcatcataacattaaactttttgag
acagcaattcaagcgtctaaaacatttaatccaatcatgagtaactcaagccaggagaaa
ggcggtggaggtggtggttcaggttcaggtggacctggtggaccaggaggaatgaaaaga
ataattggacatgatgacgacgaggaggatcctgaaaatgataactcaaatccagctaat
cccccagcatttgacatctatcgaacaagacaattgcaaaaaagagtgaagtga
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