Tetranychus urticae (two-spotted spider mite): 107362872
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Entry
107362872 CDS
T04901
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107362872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107362872
03036 Chromosome and associated proteins [BR:
tut03036
]
107362872
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107362872
Chromosome and associated proteins [BR:
tut03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107362872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup96
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
107362872
NCBI-ProteinID:
XP_015785500
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MFGTPQTSTTSPFNAPSTSQNTFGFGTPANRMQSTFGQPAAFTANRTAPATGFGVGATTS
TGLFGSQTSTTPFFGSPSTTQQTTAFGATSTAASPFGGGAATTSLFGGTNTAQTSTQSLF
GQNTFSATTPFSGATATNTMQAPGTTVKFNPLIGSDTMLKNNINTTISTRHQCITAMKEY
ETKSMEELRWEDYQANRKGPQAQGAMFGQTATTESLFGATQQQQQQQQQQQQQQQQSATT
APFSSGTNSIFGKPTFGTSTSLFNAPTFGTQQAKPAFGTAPTTTTFSFGPVNQQPATVTS
GGSLFNPTPSSFTPSTNFFQPPATNTQTKSLFGTSTTTATPSLFGAQATTTTPSLFGANA
STTAAKPGFGLPTTGTNTFGTTAPFGQNTFMFNSNPATTAASLFSSNLSTTVSTANTNAM
NKPANLFNFSSNPITTPSFNAGTTNFFGAQNTSGSMFTNSLQTGQSQVQPISLQQSLSQN
MPTSELLMNRLQNMPYGDSPVFQNVNGLSQSLPMKFSDSKTLYQYKVSNKSASNSKVIRK
AGSATLNSSFLFDDLEDEKAQEEPKSALDLFAPRRNIKRLVLKPKDSSLNASITDSPTLS
FAQRPISSASKENVAENTVSELFSINQNNATNASNTTTTITTGNINNNNNNSNHGTPRNS
VTFGETSIMGDNLNNSSLLGVGDSNDESSLICPSTPPPPLKCGLKLTKLDYYTKPAYKDL
DKYYNSSNDTCPVPSFIIGREGYGEIYWEDPLDVKGLNLDEIVHIRRKEVIVYPDDDCKP
EIGEGLNRPAQITLHQVWPVDKTTHEIIKDIDRLRTMKYTEKIEAATNKLGATFKEYRPE
SGSWVFCVKHFSKYGLVDDDDDDLPDDKEQLPPPPPPPSSVLPAGRLILHKPSQSTQTKE
PPTFEIMEMRSDKSYADYTLIHDRSALNISQISQITGAGALVTDFKDLSVEKVPEIFSSY
YDSMRFALFSEEDDGDQVAQTNFKRPKRTPNVADEKKPMVEMPTSYVTKIHFVKKRELIL
EPDIFPFSHNLFYDSCAVRHSLSPKIRFFNGSSNFTLIKGTNVIIYNLDLISEVSDHYSR
FDTQLKDNSTISSQESEPPFIETKPKALNKHNVAHLEKFVEAFFGDLSETTLYGQQHERI
NRVIDWLAERNKLVKKPRDLSSRIIHNLCCNDLKGAIDEALVGRMPKISILLCSGNNLNV
KSSTIKQLESWRKSGADAFIDKNLLKIYVILSGGVRWVTSSGDEIDVLDGLTWTQQLCLM
LVFSTHDGLPDCIENLTVETNDIEYHLLARHSPFHAIDAADNYLEGWFLHQSLQSYKVIE
NDSRSDLIHMIVWSQLISKNVLLACFVACHIKDDFLRNYAVTEAITHYSPVFRAQDDSHL
LSSLSIPKSLLSRLKAIYFKNIFDYEKYAFALLEGEEWSKAHDAFVDKIFPELVIYSDLA
TLRQIIDQLKPHREKIPNWFSNGANVYDIYSQALISQSDANLDDFNAHLLKCENDRQTLC
QSEMARKMNYILVSLRGGLYQLNTPIPPDYALKELNFNCRQLLNVISQ
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaacaccacaaacttcaaccacaagcccatttaatgcaccatcaacctcacag
aatacatttggctttggaactccagccaacagaatgcaatcaacttttggtcaacctgct
gcatttacagccaatagaacagcaccagccacaggattcggtgttggtgctactactagt
actggtttatttggctcgcaaacatctacaacacctttctttggttcaccatcaacaaca
caacaaacaacagcgtttggagctacttctacagctgcttctccttttggtggtggtgct
gctacaacatcacttttcggtggaacgaataccgctcaaacaagcacacaatctctgttt
ggtcaaaacacattctcagctacaactccattcagtggagcaactgctactaatacaatg
caagctcctggtactactgtcaaatttaatccattaattggaagtgatacaatgttgaag
aacaatatcaacactactatcagtactcgacatcaatgtatcactgccatgaaagagtat
gaaacaaaatcaatggaagagttacgttgggaagattatcaagctaatcgtaaaggtcca
caagctcaaggagctatgtttggtcaaacggctactactgaatctttgtttggtgctaca
caacaacaacagcagcaacagcaacagcagcaacagcagcagcaacaaagtgccactact
gctccatttagctctggtacaaactcaatatttggtaaaccaacatttggtacatcaaca
tcactctttaatgcaccaactttcggtacacaacaagcaaagcctgcatttggaacggca
ccaaccacaacaacattttcttttggacctgtaaaccaacaacctgcaactgtcacctct
ggaggatcattattcaacccaactccatcatcatttactccaagtaccaatttctttcaa
cctccagctacaaatacacaaaccaaatcattatttggtacctcaactactacagctact
ccttcgttatttggtgcacaagctacaacaacaactccatcattattcggagctaatgca
tctactactgctgcaaaacctggatttggattaccaaccacaggtactaatacttttgga
actacagcaccctttggtcaaaacactttcatgtttaactctaatccagccacaacagca
gcatctttattttcgtctaacttgtcaacaacagtttctaccgccaatacgaacgcaatg
aataagccagcaaacctattcaacttctcaagtaatcctattaccacaccttcattcaac
gccggtactacaaacttttttggtgctcaaaatacatctgggtctatgtttacaaactct
ctccaaactggacagtcacaagtgcaaccaatttcgttgcaacaaagtttgtcccaaaat
atgcctacttctgaattattaatgaatcgactccaaaacatgccatatggtgactcgcct
gtctttcaaaatgttaatggtttgagtcaatctttgcctatgaagttttcagattcgaaa
actttatatcaatataaagttagcaataaatctgctagtaactcaaaggtgattcgtaag
gcgggatccgctacattaaattcatcatttttatttgatgatctagaggatgaaaaagcg
caagaagaacctaaatcagctttggatttatttgcacctcgcagaaacattaaaagatta
gttctcaagcctaaagattcatcgctaaatgcatcaattaccgattcaccaactctatcg
tttgcacaaagaccaatttcaagtgcatccaaagaaaatgttgctgaaaatactgtttct
gaacttttctcaatcaatcaaaataatgctacaaatgcatcaaacacaaccacaaccatc
accaccggcaacatcaacaataataataacaatagtaatcatggcactccacgtaattca
gttacttttggtgaaacatcaataatgggtgacaatcttaataattctagtttgcttggt
gttggggattcaaatgatgaaagtagcctgatttgtccgtctacacctccaccaccatta
aaatgtggattaaaattgacaaaattagattattatactaaacctgcgtataaagatctt
gataaatattacaattcatcaaatgatacctgtccagttcctagttttattattggccgt
gaaggatatggtgaaatttattgggaagatccattggatgttaaaggtttaaatcttgat
gagattgttcatataagaagaaaagaagtaattgtttatcctgatgatgattgtaaacct
gagattggtgaaggacttaatagaccagctcaaataactttacatcaagtttggccagtg
gataaaacaactcatgaaataattaaagatattgatcgactacgaacaatgaaatatact
gaaaaaattgaagccgcaacaaacaagttaggagcgacttttaaggaatatagacccgag
tctggatcatgggtcttttgtgttaaacatttttcaaaatacggtctagttgacgatgac
gatgatgatctaccagatgacaaagaacagttgccgcctcctcctcctcctccttcatcc
gtccttcctgctggtcgattaattctccataaaccatcccagtcaactcaaacgaaagag
ccacctactttcgaaatcatggagatgcgttctgataaaagttatgctgattatactctt
attcacgatagaagtgctctaaacataagtcaaatcagtcaaataaccggggctggggct
ttggtcaccgatttcaaagatctttcagtcgaaaaagtccctgaaattttctcaagctat
tatgattcaatgagatttgctttgtttagtgaagaagatgatggcgatcaagtcgcacag
acaaattttaaaagacctaagcgaacgccaaatgtagctgatgaaaagaagcctatggtc
gaaatgcccacaagctatgttaccaaaattcattttgttaagaagcgtgaattaatttta
gagcccgatattttcccttttagtcataatcttttctatgatagctgcgctgttcgtcat
agcttgtcaccaaaaattagatttttcaatggatcatcaaattttaccctgataaaaggc
actaacgttatcatctataacctcgatctcatttccgaagtttcagaccattattcacga
ttcgatacccaattaaaagataattcaactatttcaagtcaagaaagtgaaccaccattt
atcgaaactaaaccaaaggctcttaataaacataatgttgcccacttggaaaaattcgtg
gaagccttttttggagatttgagtgaaacaactttatatggacaacaacacgaaagaatc
aaccgagttattgactggttagctgaaagaaataagttagtgaaaaaaccaagagatctt
tcctctcgaataatccacaatctgtgttgtaatgacttaaaaggagccattgatgaggca
ttagtcggtcgaatgcctaaaatttcaattttactttgttccggaaataatttgaatgtt
aaaagcagcacaatcaaacaattggaaagctggagaaaaagtggcgctgatgcctttatc
gataaaaatcttcttaaaatttacgtaatactttctggtggtgttagatgggtaaccagc
tctggagatgaaattgatgtgcttgacggattaacttggacacagcaattatgtttaatg
cttgtcttttcaactcacgatggtcttccagattgtattgaaaatcttaccgttgaaaca
aatgacattgaataccatttactcgcccgccattcacctttccatgcaatcgatgctgca
gataattatctggaaggatggtttctccatcaatctttacaaagttataaagttattgaa
aatgattctcgaagtgatcttatccatatgattgtttggtctcaattgatatccaaaaat
gtattgttagcttgttttgtggcctgccatataaaagacgatttcctacgtaattatgct
gttacagaggcaattacacattactctccagttttccgagctcaagatgattctcattta
ttatcatctttatccattccaaaatcattgctctcccgtttgaaagctatctattttaag
aatatttttgattatgaaaaatatgcttttgcactactcgaaggagaagaatggtccaaa
gcacatgatgctttcgttgataaaatatttccagagttagttatttattctgacctggct
actcttcgacaaattattgatcagttaaagcctcatcgtgaaaaaataccaaattggttt
tctaatggtgcgaatgtttacgacatttattcgcaagctttaatcagtcaatcagatgcc
aaccttgatgatttcaatgctcatctattaaaatgtgaaaatgaccgacaaaccttgtgt
caaagtgagatggctcgaaaaatgaattatatcctggtttctcttcgtggaggtctttac
caattgaacacgccgattccgcctgattatgccttgaaggaattaaacttcaactgtcgt
caattactcaatgttatctcacaatag
DBGET
integrated database retrieval system
