Tetranychus urticae (two-spotted spider mite): 107363658
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Entry
107363658 CDS
T04901
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03022
Basal transcription factors
tut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107363658
09124 Replication and repair
03420 Nucleotide excision repair
107363658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tut03021
]
107363658
03400 DNA repair and recombination proteins [BR:
tut03400
]
107363658
Transcription machinery [BR:
tut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107363658
DNA repair and recombination proteins [BR:
tut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107363658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
EF-1_beta_acid
Motif
Other DBs
NCBI-GeneID:
107363658
NCBI-ProteinID:
XP_015786403
UniProt:
T1KEX6
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MTTSSEDILLLVNGVRNKKNDGTLYLMEARIAWMPNGKDCFTISHKYADIKMQKISPEGK
AKVQLQLVLHSGDTTTYHFVSPEGVEKQLSDRDMVKQLLQQLLPKFKKKISKELEEKNRI
LQEDPDLFNLYKDLVVSGVITSDEFWTQLAPIRCPQLIKTLNLSPTSTLDKSNLAVNLHS
SNEQMVGISAAFLSDIKPQADGCNGIKYNITTDIIEAIFRTYPAVKKKHFENVPHKITEA
EFWTRFFQSHYFHRDRVFSGSSGSSKGDLFADCAKSDEIDIKTAARRGVKDPFVDITYFD
DVDYTNNSSDPKNEDKSKKDRDSSTLPNANQALIKRFNLHSIMILEASKSDSTGKISATV
NGHSSPSPASTSSTPHVNGVVKGKNKDKEKDISDTSLNNNLGKNHIEDDSEEIKRVKKQR
LKEKTELEDLDAEALIDPLSWSTKESKMLKISNKQRYLEGPTQDSGNHNHYNNLTLLQSV
YHQDNILTNWRLSLNNSLSSPAAITALSALSPGGAYFKNTHTASLKDVIPADIQSQLKQL
YFSCNELLRHFWACFPVTSPLIEEKLCQMKSTLERFQFTKVQAFHDKLVKDHYDSELTSH
LLSQLQLAYNKFNSWQLKKSALMRK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttcttctgaggatatattactccttgtaaatggagtccggaataagaaaaat
gatggaactctttacctcatggaagctcggatcgcctggatgccgaatggtaaagattgt
ttcactatcagtcataaatatgcggatattaagatgcagaaaatatcacccgaaggaaag
gcgaaagttcaattacaattggtcctgcattccggtgacactacaacataccattttgtc
agcccagagggggtagaaaaacaattaagtgatcgtgatatggttaaacaattactacaa
caattattacctaagtttaaaaagaaaatttccaaagaattagaagaaaaaaatcgtatt
ctccaagaggatccagatctgtttaatttatataaagatttggttgttagtggtgttatc
acaagtgatgaattttggactcaattagcacctattaggtgtccacaattgattaaaact
ctaaatttgtctccaacatctactctagataaatctaatttagctgttaatctccattcc
tccaatgaacaaatggtgggaatttctgctgccttcctctcggacatcaagcctcaagct
gatggctgtaatggtattaagtacaacattactacagacattattgaagcaatattccgt
acatatccagcagtgaaaaagaaacattttgaaaatgttcctcataaaatcacagaagca
gaattttggactcgattctttcaaagtcattatttccatcgtgatagagtttttagcggt
tcatctggttcttcaaaaggagatcttttcgctgactgtgctaagtcagacgagatagat
attaaaactgcagctagaagaggtgtaaaagatccatttgttgatattacttattttgat
gatgttgactatacaaataattcaagtgatcccaaaaatgaggataaatcgaaaaaagat
cgagatagctcaactttaccaaacgctaatcaagcgttgatcaaaagattcaatttacat
tcaattatgattttagaagccagtaaaagtgactcaacgggtaaaataagtgccaccgtc
aatggtcattcatctccatcaccagcatctacctcatcaactccccatgtgaatggcgtt
gttaaggggaaaaataaggataaagaaaaagacattagtgatacatctttaaacaataat
ttaggtaaaaatcatatcgaagatgattcagaggaaatcaaaagagtcaagaagcaacgt
ttaaaggaaaaaactgaattagaagatctagacgccgaagcgttaatcgatcctctttca
tggtcaacaaaagaatctaagatgttaaaaattagtaacaagcaaaggtatctcgaagga
cctacacaggattcaggaaaccacaatcattataacaatttaacacttctacaatcagtt
tatcatcaagataatattctaacgaattggcggttatctttaaataactctctctcatcg
ccggccgctattactgctctaagtgcattatctcctggaggagcgtactttaaaaacact
cacaccgctagccttaaagacgtcataccagctgatatccaaagccaattgaagcaactt
tatttctcgtgtaatgagttacttagacacttttgggcctgctttcctgtcacaagtcca
cttatcgaggaaaaactatgtcaaatgaagtctacattagaaagattccaatttaccaaa
gtccaagcttttcatgataaattagtgaaagaccattacgattcagagctcacatctcat
ctattaagtcaattgcagttagcttacaacaaatttaattcttggcaacttaaaaagtca
gctttaatgcgcaaataa
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