Tetranychus urticae (two-spotted spider mite): 107363732
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Entry
107363732 CDS
T04901
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107363732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tut03041
]
107363732
03009 Ribosome biogenesis [BR:
tut03009
]
107363732
Enzymes [BR:
tut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107363732
Spliceosome [BR:
tut03041
]
Complex A
U2 snRNP components
U2 related factors
107363732
Complex B
107363732
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107363732
Ribosome biogenesis [BR:
tut03009
]
Eukaryotic type
90S particles
Helicases
107363732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
SRP54
AAA_19
nSTAND3
ABC_tran
Flavi_DEAD
ResIII
PhoH
AAA_7
Motif
Other DBs
NCBI-GeneID:
107363732
NCBI-ProteinID:
XP_015786490
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MSKRHRVDLGDRPKTRRFEADDDPSAYKSDSNPSTSWASGDAPGQGLSSPIASTSTNVAS
STKTAGINPLTKLPYSQKYFELFRKRIQLPVWEYREKFFDLLDKNQILVLVGETGSGKTT
QIPQWCVEHLREKNKKSGVACTQPRRVAAMSVATRVSEEMDVVLGSEVGYSVRFEDCTSK
STVLKYMTDGMLLREAMSDPLLENYSIILLDEAHERTLATDILMGVLKQVITKRDDLKIA
VMSATLDASKFQNYFDNAPLLNVPGRTHPVEIFYTPEPERDYLEAAIRTTIQIHVSEETE
GDILVFLTGQEEIEEACKRIKREVENLGPDVGEIKCIPLYSNLPPAMQQRIFEAAPPNKP
NGLIGRKVVVSTNVAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR
AGRAGRTKPGKCFRLYTEKAYKTEMQENTYPEILRSNLGSVVLQLKKLGIHDLVHFDFMD
PPAPETLMRALELLNYVGALDDEGELTELGSIMAEFPLDPQLAKMLIASCDFNCSNEALS
ITAMLSVAQCFVRPNDLKKAADEAKMRFAHIDGDHLTLLNVYHAFKQHHDDPQWCYENFI
NYRSLKSADNVRQQLSRIMDRFDLKRVSTEFTHREYYVNIRKAIVAGFFMQAAHLERTGH
YLTVKDNQVVQLHPSTCLDHKPEWVIYNEFVLTTKNYIRTVTDIKPEWLIRIAPNYYDLD
NFPPGDAKRQLEYIKAKMEAKQFQGF
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgtcatagggtagatttaggtgatagacccaagactaggagatttgaggcc
gatgatgacccatccgcgtacaaaagcgattctaatccaagtacttcttgggccagcgga
gatgcacctggacaaggtttatcttcaccgatagcatcaacgtcaacaaatgtggcatct
tcgaccaaaactgctggaatcaaccctttaactaaattaccatattctcaaaaatatttt
gaattgttccgtaaaaggattcaacttcctgtatgggaatatcgagagaagtttttcgac
cttctcgataaaaatcaaatattagttttagtgggagaaactggttctggaaaaactact
cagatacctcaatggtgtgttgaacatcttcgcgagaaaaataaaaaatcaggagtcgca
tgtacacaaccaagaagagtagcagcaatgagcgttgctacgagagtttctgaagaaatg
gatgtcgtcttgggatcagaagttggttacagcgttcgatttgaagattgcactagcaaa
agtactgttcttaaatacatgacagatggtatgcttttgagagaagctatgtcagatcct
ttattagaaaattacagtataattcttcttgatgaggctcatgaaagaacattagcaact
gatattttaatgggtgttctcaaacaagtcatcaccaaacgagatgatttgaaaattgct
gttatgagtgccaccttagatgccagcaaattccaaaattattttgataatgctcctctg
ctcaatgtacctggaaggactcatcctgtggaaatattttatacacccgaaccagaaaga
gactatttagaggctgctataagaacaactattcaaattcatgtatcagaagaaacagaa
ggcgatattctggttttccttacaggacaagaggaaatcgaagaagcgtgtaaaagaatc
aaacgcgaagtcgaaaatcttggaccagatgtcggtgaaataaaatgcattcctttatat
tcaaatcttcctccagcaatgcaacagcgtatttttgaagcagctcctcctaataaacct
aatggattaattggccgtaaggttgtagtgtcgacaaatgttgctgaaacttctcttacc
attgacggagttgtattcgttattgatcctggatttgccaaacaaaaagtatacaatcca
agaattcgtgttgagtcactattggtgtcaccaatttcaaaagcttctgctcaacaacga
gctggtcgagcaggtcgaacaaaaccgggaaaatgtttccgcttatatacggaaaaggct
tataaaacagaaatgcaggaaaacacgtatccagaaattttacgttcaaatttgggctct
gtggtattacaattaaaaaaacttggaattcatgatcttgtacattttgattttatggat
ccaccagctccagaaactttgatgcgtgcattggagcttctcaactatgttggtgcttta
gatgatgaaggagaattgactgaattaggttcaataatggctgaatttccactagatccc
caactagcaaaaatgttgattgcttcttgtgattttaattgttccaatgaggctttatcg
ataactgccatgctttcagtggctcaatgttttgtgcgaccaaacgatcttaaaaaggct
gctgacgaggcaaaaatgcgttttgctcatatcgatggtgatcatttaacacttcttaat
gtttatcatgccttcaaacaacaccatgatgatcctcaatggtgttacgaaaactttata
aactaccgatcattaaaaagcgcagataatgtccgccaacagctctctagaattatggat
agatttgatttgaaacgggtttcaactgaatttactcatagagaatattacgtgaacata
aggaaagcaattgttgcaggatttttcatgcaggctgctcatttagaaagaacaggtcac
tatttgactgttaaagataaccaagttgttcaacttcatccatcaacttgtcttgatcac
aagccagaatgggttatttacaacgaatttgtattaactaccaaaaattatatcagaact
gtaactgatatcaaaccagaatggcttataagaatagcaccaaattattatgatttagat
aattttccacccggagatgcaaaacgtcaactagaatatataaaggctaaaatggaggca
aagcaatttcaaggcttttga
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