Tetranychus urticae (two-spotted spider mite): 107365315
Help
Entry
107365315 CDS
T04901
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tut03036
]
107365315
Enzymes [BR:
tut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
107365315
Chromosome and associated proteins [BR:
tut03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107365315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
zf-CCCH
YmgL
Motif
Other DBs
NCBI-GeneID:
107365315
NCBI-ProteinID:
XP_015788284
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MYSFSTLNRENENIAKLISGIKLPDLGLVKKQCIAFGEFIPYPVDSINQIPGYETDYLHK
IQEKNFSTPTPVQAHLWPIIFRGRSATCISAPKSGKTLAYLIPALSSTQFANKDPAAIIY
GDEGPKVVIVCYGMSKAYEIRDYCLDLLDGAKEPRVLTITIDNEKKVPLKLLNGCEILIS
TPGPLKRLIADGYIRFDICSLLVFDNADKIFTIQPEFVQSIVLSYFTSYRKRLRVNDDNL
NSLLTAPMLVLADSWTKEVANFSKEYMKNSINIFGDLFEAAIAHDLNYKVHFVEAEEERI
SYLGDLIHGLLCRGTLNRIAIVCSNDAEIDIVIKAMTDLDVEPVALDSSNFNYEIAKLID
LCKNHPRAITIITDDKIKEVPQLNFIDTLVHYSMPVHSDIFRIRFLLMSNLIKNGEQINT
HFLLSPVNGNHAHFLCQTLRRISEIPSCLNNLRNLSYRPLCENFLAFGFCPFESTICINR
HEFKPCESPNEDLPMDGQVKFEICHIITINQFYIRIVEYRDSRNEDGHWVKYPCLYRSIK
NELQAYKQGPFTDDKIPTIGKIYGLAVLGTVHRVRIIENLGQLTVKETNAPLNEDTPYQL
QVSFVDFGHQSKALSNQLIELPENLRDYPSLAFKAYLLGIKPVDGDMEWTHNPTETLSRF
MSDGKVLKASAWIRLQRKSIFWIDNMQITQNLKVLDVIVTSWNPKSDLIDTGLAVKNDKM
FDQVNVNLIELSIKWRNCSLVKSASQAFLPDDLEFVYLSHFQNLDTFYILRQTYYKCLEN
LEKELAKSQLAPMKSFSNGCLGIGMLKTDTFTSYSRILIKQHFPEENLVQVFFVDWGETS
KIPSDCCFTIEEKYIKRLPFQAIKCSLFGVEGSPEPDAIYDLTRTEDDIFKDCWIKKVSG
SKENGYSIRLWFHLEKSACETKFHLLSNWLVENGHAKYSDPSEKEQDKILTTVNQKANED
ESDASFEEEWKNGEKECLQNLLGAIDNGMRSYLGEHAEKDPVQFDPKKLPRAKRLIMRLK
KQKEAERRAQESSSDSEDDNAKAPKEFTPLPKRVIDFSKVLPYDPTTSEESELDSDLEDA
YGIEELN
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcttttcaactctgaatcgtgaaaatgaaaacattgccaagctaatatctggc
atcaaattacctgatcttggtttggttaaaaagcagtgtattgctttcggcgaattcatt
ccgtatccagttgattcgattaaccagattcctggttatgaaaccgattaccttcataaa
attcaagaaaaaaatttttcaactccaactcctgttcaagctcatctctggccaataata
tttcgaggaagatcagctacatgtatatcagctcctaagagcggtaagactcttgcgtat
ttgattcctgctttgagctctactcaattcgcaaacaaggaccctgccgcaataatttat
ggcgatgaaggaccgaaagtggttattgtttgttatggaatgagtaaagcgtatgaaatt
cgagattactgtcttgatttactggatggcgcaaaggaacctcgtgttcttaccatcacc
atagacaatgagaaaaaagtaccacttaaactcctgaacggctgtgaaattttgatttcg
actccaggacctcttaaaagactaatcgcagatgggtacattcgtttcgatatctgttcg
ctgctagtcttcgataatgctgataaaatattcactattcaacctgagtttgttcaatcg
attgttttatcatattttacttcatataggaaaagattgcgtgtaaatgacgacaatctt
aatagcttactaactgcaccgatgctggttttggctgattcatggacgaaagaagttgca
aatttttccaaggaatatatgaaaaactctataaatattttcggtgatttatttgaagct
gctatcgctcatgatttaaattataaagtccattttgttgaagccgaagaagaacgtatt
agctatttaggtgatttgattcatggtcttctttgcagaggtacattaaatcgcatcgca
atagtatgctctaatgatgctgaaattgatattgtgattaaagcaatgactgatttggat
gttgagccagttgccctcgattcgtcaaacttcaactatgagattgctaaattgatcgat
ttatgcaaaaatcatcccagagcaatcactatcataaccgatgataaaattaaagaggtc
cctcaactcaattttatcgacactctcgtgcattacagtatgcctgttcatagtgatata
ttcaggataagatttcttttaatgtctaatttaattaagaatggtgaacagataaatact
cactttcttttatcccctgttaatggtaatcatgctcactttttgtgtcaaactcttcga
cgaatcagtgaaattccctcctgcttgaataatttgagaaacttgtcataccggccttta
tgtgaaaattttctcgcctttggattctgtccttttgaatctacaatatgtattaatcgc
cacgaattcaagccttgtgaatcacctaatgaagatcttcctatggatggccaggtgaaa
ttcgagatatgccatatcattactatcaaccagttctacattcgtattgttgaatatcgt
gatagccgtaatgaagatggacactgggtaaaatatccttgtctttatcgctcgataaag
aatgaactacaagcttataaacaaggaccattcactgatgataaaatacctacgattggc
aagatatatggacttgcagttcttggtactgtgcatagagtgcgaatcatagagaacctt
ggccaattgactgtaaaggaaaccaacgcaccactcaatgaagatacgccttatcaacta
caagtgtcttttgttgactttggacatcaaagcaaagcgttatccaatcaattaattgaa
ttgcctgaaaatttgagagactatccatcattggcttttaaagcatatcttctaggaata
aaaccagttgatggtgacatggagtggactcacaatccaactgaaacgctttctagattc
atgagtgacggtaaagtgttaaaggcatctgcttggatacgcttgcaaagaaaaagcatt
ttttggattgataatatgcaaatcacccaaaacttgaaggttcttgatgtcattgttacc
agttggaatccaaaatctgatttaattgatactggtttagccgtgaaaaatgacaaaatg
tttgaccaggtcaacgtaaatctaattgaattatctattaaatggcgaaattgtagtttg
gttaaatcagcatcacaagccttccttcccgatgatctcgagtttgtttatctttctcat
ttccaaaatcttgacactttttatattctaagacaaacttattacaaatgtttagaaaat
ttggagaaagaattagctaaatctcaactagctcccatgaaatctttcagcaatggctgt
ttgggtataggtatgctcaaaacagatacatttacatcttacagccgtatattaatcaaa
caacattttcctgaagaaaatttagttcaagttttctttgttgactggggtgaaacgagc
aagattccttctgattgttgttttaccatagaagaaaagtatataaaaagattgccattc
caggcaataaagtgttcgctttttggagttgaagggtcgcctgaacctgatgccatttat
gacttgaccagaaccgaagatgacatattcaaggattgctggattaaaaaagttagtgga
tctaaagaaaatggctattctattagactttggtttcatctggaaaagtcggcttgtgaa
actaaatttcatcttctatcaaattggctagttgaaaatggacatgctaagtactcggat
cccagtgaaaaggaacaggacaaaattttgacaacggttaatcaaaaggccaatgaagac
gaaagtgacgcttcttttgaagaggaatggaagaatggagaaaaggaatgtcttcaaaat
ttactaggcgctatcgataatggaatgagaagctatttgggcgagcatgctgagaaggat
cctgttcaatttgatcctaagaaactaccacgagctaagagattgataatgcgattgaaa
aaacagaaagaagcagagcgacgtgcacaagaatcgagcagtgactcagaagacgataac
gccaaagcaccaaaagaattcacaccattacctaaacgtgtaattgatttcagcaaagtt
ttaccatacgacccaactacatcagaagaatctgaattagactcagatcttgaggatgca
tatggtattgaagagttaaattga
DBGET
integrated database retrieval system
