Entry |
|
Name |
(RefSeq) putative ATP-dependent RNA helicase TDRD12
|
KO |
|
Organism |
tut Tetranychus urticae (two-spotted spider mite)
|
Brite |
KEGG Orthology (KO) [BR:tut00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:tut03036]
107365315
Enzymes [BR:tut01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
107365315
Chromosome and associated proteins [BR:tut03036]
Eukaryotic type
Gene silencing
piRNA pathway
107365315
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1087 aa
MYSFSTLNRENENIAKLISGIKLPDLGLVKKQCIAFGEFIPYPVDSINQIPGYETDYLHK
IQEKNFSTPTPVQAHLWPIIFRGRSATCISAPKSGKTLAYLIPALSSTQFANKDPAAIIY
GDEGPKVVIVCYGMSKAYEIRDYCLDLLDGAKEPRVLTITIDNEKKVPLKLLNGCEILIS
TPGPLKRLIADGYIRFDICSLLVFDNADKIFTIQPEFVQSIVLSYFTSYRKRLRVNDDNL
NSLLTAPMLVLADSWTKEVANFSKEYMKNSINIFGDLFEAAIAHDLNYKVHFVEAEEERI
SYLGDLIHGLLCRGTLNRIAIVCSNDAEIDIVIKAMTDLDVEPVALDSSNFNYEIAKLID
LCKNHPRAITIITDDKIKEVPQLNFIDTLVHYSMPVHSDIFRIRFLLMSNLIKNGEQINT
HFLLSPVNGNHAHFLCQTLRRISEIPSCLNNLRNLSYRPLCENFLAFGFCPFESTICINR
HEFKPCESPNEDLPMDGQVKFEICHIITINQFYIRIVEYRDSRNEDGHWVKYPCLYRSIK
NELQAYKQGPFTDDKIPTIGKIYGLAVLGTVHRVRIIENLGQLTVKETNAPLNEDTPYQL
QVSFVDFGHQSKALSNQLIELPENLRDYPSLAFKAYLLGIKPVDGDMEWTHNPTETLSRF
MSDGKVLKASAWIRLQRKSIFWIDNMQITQNLKVLDVIVTSWNPKSDLIDTGLAVKNDKM
FDQVNVNLIELSIKWRNCSLVKSASQAFLPDDLEFVYLSHFQNLDTFYILRQTYYKCLEN
LEKELAKSQLAPMKSFSNGCLGIGMLKTDTFTSYSRILIKQHFPEENLVQVFFVDWGETS
KIPSDCCFTIEEKYIKRLPFQAIKCSLFGVEGSPEPDAIYDLTRTEDDIFKDCWIKKVSG
SKENGYSIRLWFHLEKSACETKFHLLSNWLVENGHAKYSDPSEKEQDKILTTVNQKANED
ESDASFEEEWKNGEKECLQNLLGAIDNGMRSYLGEHAEKDPVQFDPKKLPRAKRLIMRLK
KQKEAERRAQESSSDSEDDNAKAPKEFTPLPKRVIDFSKVLPYDPTTSEESELDSDLEDA
YGIEELN |
NT seq |
3264 nt +upstreamnt +downstreamnt
atgtatagcttttcaactctgaatcgtgaaaatgaaaacattgccaagctaatatctggc
atcaaattacctgatcttggtttggttaaaaagcagtgtattgctttcggcgaattcatt
ccgtatccagttgattcgattaaccagattcctggttatgaaaccgattaccttcataaa
attcaagaaaaaaatttttcaactccaactcctgttcaagctcatctctggccaataata
tttcgaggaagatcagctacatgtatatcagctcctaagagcggtaagactcttgcgtat
ttgattcctgctttgagctctactcaattcgcaaacaaggaccctgccgcaataatttat
ggcgatgaaggaccgaaagtggttattgtttgttatggaatgagtaaagcgtatgaaatt
cgagattactgtcttgatttactggatggcgcaaaggaacctcgtgttcttaccatcacc
atagacaatgagaaaaaagtaccacttaaactcctgaacggctgtgaaattttgatttcg
actccaggacctcttaaaagactaatcgcagatgggtacattcgtttcgatatctgttcg
ctgctagtcttcgataatgctgataaaatattcactattcaacctgagtttgttcaatcg
attgttttatcatattttacttcatataggaaaagattgcgtgtaaatgacgacaatctt
aatagcttactaactgcaccgatgctggttttggctgattcatggacgaaagaagttgca
aatttttccaaggaatatatgaaaaactctataaatattttcggtgatttatttgaagct
gctatcgctcatgatttaaattataaagtccattttgttgaagccgaagaagaacgtatt
agctatttaggtgatttgattcatggtcttctttgcagaggtacattaaatcgcatcgca
atagtatgctctaatgatgctgaaattgatattgtgattaaagcaatgactgatttggat
gttgagccagttgccctcgattcgtcaaacttcaactatgagattgctaaattgatcgat
ttatgcaaaaatcatcccagagcaatcactatcataaccgatgataaaattaaagaggtc
cctcaactcaattttatcgacactctcgtgcattacagtatgcctgttcatagtgatata
ttcaggataagatttcttttaatgtctaatttaattaagaatggtgaacagataaatact
cactttcttttatcccctgttaatggtaatcatgctcactttttgtgtcaaactcttcga
cgaatcagtgaaattccctcctgcttgaataatttgagaaacttgtcataccggccttta
tgtgaaaattttctcgcctttggattctgtccttttgaatctacaatatgtattaatcgc
cacgaattcaagccttgtgaatcacctaatgaagatcttcctatggatggccaggtgaaa
ttcgagatatgccatatcattactatcaaccagttctacattcgtattgttgaatatcgt
gatagccgtaatgaagatggacactgggtaaaatatccttgtctttatcgctcgataaag
aatgaactacaagcttataaacaaggaccattcactgatgataaaatacctacgattggc
aagatatatggacttgcagttcttggtactgtgcatagagtgcgaatcatagagaacctt
ggccaattgactgtaaaggaaaccaacgcaccactcaatgaagatacgccttatcaacta
caagtgtcttttgttgactttggacatcaaagcaaagcgttatccaatcaattaattgaa
ttgcctgaaaatttgagagactatccatcattggcttttaaagcatatcttctaggaata
aaaccagttgatggtgacatggagtggactcacaatccaactgaaacgctttctagattc
atgagtgacggtaaagtgttaaaggcatctgcttggatacgcttgcaaagaaaaagcatt
ttttggattgataatatgcaaatcacccaaaacttgaaggttcttgatgtcattgttacc
agttggaatccaaaatctgatttaattgatactggtttagccgtgaaaaatgacaaaatg
tttgaccaggtcaacgtaaatctaattgaattatctattaaatggcgaaattgtagtttg
gttaaatcagcatcacaagccttccttcccgatgatctcgagtttgtttatctttctcat
ttccaaaatcttgacactttttatattctaagacaaacttattacaaatgtttagaaaat
ttggagaaagaattagctaaatctcaactagctcccatgaaatctttcagcaatggctgt
ttgggtataggtatgctcaaaacagatacatttacatcttacagccgtatattaatcaaa
caacattttcctgaagaaaatttagttcaagttttctttgttgactggggtgaaacgagc
aagattccttctgattgttgttttaccatagaagaaaagtatataaaaagattgccattc
caggcaataaagtgttcgctttttggagttgaagggtcgcctgaacctgatgccatttat
gacttgaccagaaccgaagatgacatattcaaggattgctggattaaaaaagttagtgga
tctaaagaaaatggctattctattagactttggtttcatctggaaaagtcggcttgtgaa
actaaatttcatcttctatcaaattggctagttgaaaatggacatgctaagtactcggat
cccagtgaaaaggaacaggacaaaattttgacaacggttaatcaaaaggccaatgaagac
gaaagtgacgcttcttttgaagaggaatggaagaatggagaaaaggaatgtcttcaaaat
ttactaggcgctatcgataatggaatgagaagctatttgggcgagcatgctgagaaggat
cctgttcaatttgatcctaagaaactaccacgagctaagagattgataatgcgattgaaa
aaacagaaagaagcagagcgacgtgcacaagaatcgagcagtgactcagaagacgataac
gccaaagcaccaaaagaattcacaccattacctaaacgtgtaattgatttcagcaaagtt
ttaccatacgacccaactacatcagaagaatctgaattagactcagatcttgaggatgca
tatggtattgaagagttaaattga |